Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0412 ATGGAAGATTTAGGTGGTATGAGGTTTGATGGCCTCGGCAATGCTGTAAGGAAGAAGCGGAGTCAAACTTTGCGCCGGCCTCGACCTGATTCACAACCTGTCTCTGAAGATCCATCTCCCTTGTCATCAACACCTTCAGATGATGCGAGCAAGGCCTCTAGTGATGAGAATACTGGTTTTGATACTAATTCTAAGAGAAAAGAATTTAATCTTAACCATTATGTCTCCAGAGTTTCGTCTACTGCTGCAGGTCATGGCTTGCATAATAGACGCAGCAGCGAGGGTGTCCTTGCTCCTGCTAATTGGAAAGGCTCTAGCAAATGCAAGGATAGCTTGGAATCAGAATCAAGTGCAGATGTTTATGGTGGAAGGAGTTCCGAAGATATGGATTTGGGGCTGTCCGGAGTTCCTCAGGATGGATCACAGAATGACAGTAGGGTTAAAAAGGTTAAGCTCAAGGTTTGTGGTGTGACGCGTACTATCCAAGCTAACTCTACATCTAATGGTTCATCAGGAAGTGGGTCCACTGTGAAGAGCTCTCGATTATCAGATGCCTCCAGAACACGCCAAAAGCAACAGCGCAATTCAGATGATAACCATTCTCTTTCATATAAGAGGAGTGGCACACAAGGCATTCCTTGGAGGAATTTCTCAAGGGGTGGATCTGGTCTTGGGAAGGAGGATTCTATGATGGGCAAAATGTCAGGAAAAAACACATATGGTAAGCAAGGAGACAAGACTGAACCAGTTCGTAAGAGCAAGCGAGTACCAAAGAAACGTGTACTTGATGGGGACTTTGGtgatgacgacgacgacgacgacgagaTTCGCTACTTGGAAAAGCTTAAAACTTCGAAAGTTTCTGCAGTCTATAGAGATGATGAAGAAGTAAGCAGGAAACATCGAAAATTATCTAGTGTCTCTAATATTGAAATTAGCACCTCATCAAGGTCAGTGAAAGATAGTAAAAACAGGTCTAGATCAGATAGAATGTTTGAGGACACAGATTATGACGAAGATGAGGAATCAAGGTCTGATGATGAGCATGAGgacaagaaaaagagaaagcagAAGAAGGAATCTGTTGATGCTTTGATGGATGGTAAGAGGGAAATGACTCTCACAACGCGCCAAAGGGCTCTTCAATCTAGCAAAGATGCCTCAGCATCTAGTGCAAGTTTAATTGAGTTTCCTAATGGGTTACCACCTGCCCCGTCTAGAAAGCAAAAGGAAAAACTCACGGAGGTGGAGCAGCAACTGAAGAAAGCTGAAGCTGCCCAAAGGCGTAGAATGCAAGTTGAGAAGGCTGCTAGGGAATCTGAGGCTGAAGCCATCAGAAAAATACTTGGTCAAGACTCTAGTAGGAAGAAGCGGGAAGAGAAAATGAAGAAGCGCCAAGAAGAACTGGCTCAGGAGAAGGCAGCTAATGCGCAGATGCTAGCATCAAACACCATCAGATATGTGATTAGTCCTGCTGGGACGGTTTTGACTTTTCCAGAGGAGATGGGCCTGCCAAGTATATTCAACTCCATACCCTCAAGTTATCCTCCTCCGCGTGAGCAGTGTGCGGGTCCATCTTGTACCAACCCATACAAGTATCGGGATTCCAAGTCTAAGCTTCCCCTTTGCAGTCTGCAGTGCTACAAGGCGGTTCAGGCAATGGTGACGGCTGAAGCTACCTGTTGA 1686 0.4407 MEDLGGMRFDGLGNAVRKKRSQTLRRPRPDSQPVSEDPSPLSSTPSDDASKASSDENTGFDTNSKRKEFNLNHYVSRVSSTAAGHGLHNRRSSEGVLAPANWKGSSKCKDSLESESSADVYGGRSSEDMDLGLSGVPQDGSQNDSRVKKVKLKVCGVTRTIQANSTSNGSSGSGSTVKSSRLSDASRTRQKQQRNSDDNHSLSYKRSGTQGIPWRNFSRGGSGLGKEDSMMGKMSGKNTYGKQGDKTEPVRKSKRVPKKRVLDGDFGDDDDDDDEIRYLEKLKTSKVSAVYRDDEEVSRKHRKLSSVSNIEISTSSRSVKDSKNRSRSDRMFEDTDYDEDEESRSDDEHEDKKKRKQKKESVDALMDGKREMTLTTRQRALQSSKDASASSASLIEFPNGLPPAPSRKQKEKLTEVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKKREEKMKKRQEELAQEKAANAQMLASNTIRYVISPAGTVLTFPEEMGLPSIFNSIPSSYPPPREQCAGPSCTNPYKYRDSKSKLPLCSLQCYKAVQAMVTAEATC 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0412 561 MobiDBLite consensus disorder prediction 276 306 - -
Sto8g0412 561 Coils Coil 406 443 - -
Sto8g0412 561 MobiDBLite consensus disorder prediction 202 216 - -
Sto8g0412 561 MobiDBLite consensus disorder prediction 73 87 - -
Sto8g0412 561 MobiDBLite consensus disorder prediction 346 374 - -
Sto8g0412 561 MobiDBLite consensus disorder prediction 158 183 - -
Sto8g0412 561 MobiDBLite consensus disorder prediction 408 470 - -
Sto8g0412 561 Pfam HIT zinc finger 518 549 IPR007529 -
Sto8g0412 561 Coils Coil 455 476 - -
Sto8g0412 561 MobiDBLite consensus disorder prediction 184 201 - -
Sto8g0412 561 MobiDBLite consensus disorder prediction 35 59 - -
Sto8g0412 561 PANTHER INO80 COMPLEX SUBUNIT B 1 559 IPR029523 GO:0006338|GO:0031011
Sto8g0412 561 SMART PAPA_1_2 417 502 IPR006880 GO:0031011
Sto8g0412 561 MobiDBLite consensus disorder prediction 375 395 - -
Sto8g0412 561 MobiDBLite consensus disorder prediction 244 265 - -
Sto8g0412 561 MobiDBLite consensus disorder prediction 1 470 - -
Sto8g0412 561 PANTHER HIT ZINC FINGER AND PAPA-1-LIKE DOMAIN-CONTAINING PROTEIN 1 559 - -
Sto8g0412 561 MobiDBLite consensus disorder prediction 318 333 - -
Sto8g0412 561 Pfam PAPA-1-like conserved region 417 502 IPR006880 GO:0031011
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0412 Sto-Chr8 2571389 2574197 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0412 - - gmx:100814323 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0412 8 2571389 2574197 Sto8g0412 8 2571389 2574197 ECH
Sto3g0812 3 5641994 5644515 Sto8g0412 8 2571389 2574197 ECH