Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0812 ATGGAAATTCTTCATGGGTCAGGGCTTCCTGCCAGCTCCACCAGGACTGGAAAAAGGAGTAGGGCGTCACGCAGACCAAGAGCTAATCCTCATGCAATGTTTCAGAGCTATTTTGGTTTGCCTTCATTTGTAGAGCCTTATGGAAAAGATGATGAGAATCAAAATCAGAATCAGCAGGATATAATGGTTGCTTCTGATGGATCAGGAGCTCAGAACAAGCTGAAGAAGCTGAAGCTCAAGTTTGGAGGTGTTATTCATACTATTCACACCAAGGCAAAGATGGAAATTACCTCCACCATTAGTTCTTATGCTACAaactcttcttcctcttctgatGATCCTAAGTATCAGTTTTCTAGCATTGAATCTGGTGTTACGGCAGAGAATCTTTCATGTAGAGAAATATCATTTGGAGAAAGTTCAACTGTGAATCACGAGCTAGTCCGTAAGAGCAAGCGCATTCCTAAAACTAAAAGACGTGCCTTGGATGTGGAATATAGtaatgaagaaaatgaagatgCAGAACTTCAGTTCCTTGAAAGACTTACTGCTTCAAAAATTGATGTTGGTTACAATGAATATAATCAGGGAACCCTCAATGATTCTGGAACACCAGGTTCGAGTAAGGATGGTAAAAAGAAGCTGAAGTCCGAAAAGAAATACGAGAATAACAGTTACATGGAAGAAGGAGGTCTAACATCCAATGGCAAGTCTATATCTGAGATGAAGAAGCTAAAGAAGGAATCTGGTGAAGCCAATGAAGTTTTATTTGGCTCAAATGCAAGCATTATTGACATCTCAGATTATTTTATTCCCACATTATCTCAAAGGAAAAAGGGCAAATTGTCAGAAATGGAGCAGCAACTTAAGAAAGCTGAGGCTGCACAGAGACGTAAAATGCAATCAGAGAAGGCGGCTCGGGAGTCTGAGGCTGAGGCCATCAGAAAGATACTTGGTCATGATTCCGGTAGGAAGAAGAAAGACGAAAAGATGAAAAAGCAAATGGAGGAATTTGCGCAGAAAAAATCTCGCAACTCCTTCTATCTCGGATCAAACACTGTTCGTTGGACTATTGGCCCCTCAGGAACTGTGGTCACTTTTTCTGAAGACATTGGTCTACCAAGTATCTTCCAGATGGTACCCAAAAGCTATCCTCCCCCTCGAGAAAGATGTGCAGGTCCAAACTGTACCAACGAGTACAAGTATCGAGATTCCAAGTCCAAGCTTCCCCTATGCAGTCTTAACTGTTATAGAGCCATACATGAGAAGATGCAACCTCTAATTGCCtgctaa 1293 0.4037 MEILHGSGLPASSTRTGKRSRASRRPRANPHAMFQSYFGLPSFVEPYGKDDENQNQNQQDIMVASDGSGAQNKLKKLKLKFGGVIHTIHTKAKMEITSTISSYATNSSSSSDDPKYQFSSIESGVTAENLSCREISFGESSTVNHELVRKSKRIPKTKRRALDVEYSNEENEDAELQFLERLTASKIDVGYNEYNQGTLNDSGTPGSSKDGKKKLKSEKKYENNSYMEEGGLTSNGKSISEMKKLKKESGEANEVLFGSNASIIDISDYFIPTLSQRKKGKLSEMEQQLKKAEAAQRRKMQSEKAARESEAEAIRKILGHDSGRKKKDEKMKKQMEEFAQKKSRNSFYLGSNTVRWTIGPSGTVVTFSEDIGLPSIFQMVPKSYPPPRERCAGPNCTNEYKYRDSKSKLPLCSLNCYRAIHEKMQPLIAC 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0812 430 Pfam PAPA-1-like conserved region 286 370 IPR006880 GO:0031011
Sto3g0812 430 MobiDBLite consensus disorder prediction 194 234 - -
Sto3g0812 430 PANTHER INO80 COMPLEX SUBUNIT B 11 430 IPR029523 GO:0006338|GO:0031011
Sto3g0812 430 Coils Coil 275 312 - -
Sto3g0812 430 SMART PAPA_1_2 286 371 IPR006880 GO:0031011
Sto3g0812 430 MobiDBLite consensus disorder prediction 1 32 - -
Sto3g0812 430 MobiDBLite consensus disorder prediction 207 225 - -
Sto3g0812 430 Pfam HIT zinc finger 387 418 IPR007529 -
Sto3g0812 430 PANTHER PAPA-1-LIKE FAMILY PROTEIN / ZINC FINGER (HIT TYPE) FAMILY PROTEIN 11 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0812 Sto-Chr3 5641994 5644515 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0812 - - aprc:113846788 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0812 3 5641994 5644515 Sto3g0812 3 5641994 5644515 ECH
Sto3g0812 3 5641994 5644515 Sto8g0412 8 2571389 2574197 ECH