Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0388 ATGGTTGTGGCTTCTTCAACATGCGGGAACATGACGATGagaagcaagaaaagaaatgctGTGGAAATTCCGACGATCGACCTTTCGATGGAACGATCAGAGTTATCGGAATTGGTGGTTGGAGCGTGCGAAGAATACGGATTCTTCAAGGTGGTGAACCACGGTGTGGCAAAGGAGGTGATTTGCAGATTGGAAAAGGAAGGAATAGACTTTTTTTCCAAACCCACATCAGAGAAGAGACAAGCCGGTCCAGCTACTCCTTTTGGGTACGGCTCCAGAAACATTGGCCCCAACGGCGATATGGGTGACCTCGAGTATCTTCTCCTTCATACCAATCCTCTCTCCATCTCTCACACTTCCAAAACCATTTCAAACAACCCTACCAACTTCAGGATGGCGGGGTCTGTGCTGATGAATGATTACATAGAAGCAGCGAGGGGAGTAGCATGTGAGATAGTTGAACTTGTGGCGGAGGGTGTGGGGGTCCCGGACAAGCAGGTGGTGAGCAGCCTCATCAGAGACGCCCACAATGACTCGGTGCTAAGGATGAATCACTACCCTCCAACTCCTACGCCTACTTCCAACACCAGCATGGGCTTTGGGGAGCATTCTGACCCTCAGATCTTGACAATCCTACGCTCCAACGATGTCGGTGGCCTTCAGATATGTACCCAGGATGGCTTCTGGATCCCTGTCCCTCCAGACCCCAATCACTTGTTTGTCATGGTTGGTGATGCCCTCCAGGTTGCTCGCTCACCTCTACTTTCCTAA 771 0.4968 MVVASSTCGNMTMRSKKRNAVEIPTIDLSMERSELSELVVGACEEYGFFKVVNHGVAKEVICRLEKEGIDFFSKPTSEKRQAGPATPFGYGSRNIGPNGDMGDLEYLLLHTNPLSISHTSKTISNNPTNFRMAGSVLMNDYIEAARGVACEIVELVAEGVGVPDKQVVSSLIRDAHNDSVLRMNHYPPTPTPTSNTSMGFGEHSDPQILTILRSNDVGGLQICTQDGFWIPVPPDPNHLFVMVGDALQVARSPLLS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0388 256 Pfam 2OG-Fe(II) oxygenase superfamily 178 249 IPR044861 -
Sto8g0388 256 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 176 256 IPR005123 -
Sto8g0388 256 SUPERFAMILY Clavaminate synthase-like 15 249 - -
Sto8g0388 256 Gene3D - 3 252 IPR027443 -
Sto8g0388 256 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 10 249 - -
Sto8g0388 256 PRINTS Isopenicillin N synthase signature 39 56 - -
Sto8g0388 256 PRINTS Isopenicillin N synthase signature 203 224 - -
Sto8g0388 256 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 249 - -
Sto8g0388 256 Pfam non-haem dioxygenase in morphine synthesis N-terminal 23 87 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0388 Sto-Chr8 2449533 2452164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0388 12 249 Glycosyltransferase AT5G59530 29.880 1.45e-21 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0388 K04125 - gmx:100777233 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0388 8 2449533 2452164 Sto13g3725 13 39129032 39131489 CCT
Sto8g0388 8 2449533 2452164 Sto8g0388 8 2449533 2452164 ECH