Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3725 ATGTCGAAGAAAACAAAGGCAGTGGGAATTCCGACGATAGACCTGTGTATGGAAAGCTCAGAATTAGCGGAAAAAGTGGTGAGAGCCTGTGAGGAATATGGTATATTCAAGGTGGTGAACCATGGGGTACCAAAGAAGGTGATTTCCAGATTGGAAgacgaaggcattcacttttttGCCAAACCCATCTCCCAGAAGCAACAAGCTGGTCCCCCTACTCCTTTTGGTTATGGTTCTAGAAACATTGGCTCCCATGGCGATATGGGTCACCTTGATTGCGCGGTGAGGGAGTATATAGAGGCGGCAAGGGAAGTAGCATGCAAGATTCTGGATGTGGTGGCAGAGGGTTTGAGGGTTCCGGACAAGTTGATGCTAAGCAGACTGATCAGAGATGCGCATAGTGACTCGGTGCTGAGGTTGAATCACTACCCTGCCAACTGGGACCCACAGGCATCGAAATCAAATTCAAGCATCGGGTTTGGGGAACACTCAGACCCTCAGATATTGACGATCCTGCGCTCCAACGACGTGAGCGGTCTCCAGATCTGCACCCACGACGGCTTGTGGATCCCGGTGCCCCCCGATCCCAATGAATTCTTTGTGATGGTGGGCGATGCCCTGCAGGTCTTCACCAATGCCAGATTCAGAAGCGTCAGGCATAGAGCCCTGACTAACACCAATAGTGGGAAGGCCAGACTCTCAATCATGTACTTTGGAGCACCACCATTGAATTCCTGGATCACTCCACTCCCAATCATGCTCTCCCACAAACACCCTCTCTACAAGCCTTTCACTTGGGCTCAATACAAGCAAGCCGCCTACTCTCTTCGCCTCCGAGATTCTCGCCTTGACCTCTTCAAGGCTCACCCTCAGCCCCACCCTCAACATCCCATCACCCATCTCATTACTGCTTCTCCCTGA 921 0.5049 MSKKTKAVGIPTIDLCMESSELAEKVVRACEEYGIFKVVNHGVPKKVISRLEDEGIHFFAKPISQKQQAGPPTPFGYGSRNIGSHGDMGHLDCAVREYIEAAREVACKILDVVAEGLRVPDKLMLSRLIRDAHSDSVLRLNHYPANWDPQASKSNSSIGFGEHSDPQILTILRSNDVSGLQICTHDGLWIPVPPDPNEFFVMVGDALQVFTNARFRSVRHRALTNTNSGKARLSIMYFGAPPLNSWITPLPIMLSHKHPLYKPFTWAQYKQAAYSLRLRDSRLDLFKAHPQPHPQHPITHLITASP 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3725 306 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 80 IPR026992 -
Sto13g3725 306 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 2 92 - -
Sto13g3725 306 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 93 289 - -
Sto13g3725 306 Gene3D - 1 281 IPR027443 -
Sto13g3725 306 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 93 289 - -
Sto13g3725 306 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 92 - -
Sto13g3725 306 PRINTS Isopenicillin N synthase signature 26 43 - -
Sto13g3725 306 PRINTS Isopenicillin N synthase signature 163 184 - -
Sto13g3725 306 PRINTS Isopenicillin N synthase signature 199 225 - -
Sto13g3725 306 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 133 249 IPR005123 -
Sto13g3725 306 SUPERFAMILY Clavaminate synthase-like 5 279 - -
Sto13g3725 306 Pfam 2OG-Fe(II) oxygenase superfamily 135 239 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3725 Sto-Chr13 39129032 39131489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3725 10 274 Glycosyltransferase AT5G59530 25.249 1.62e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3725 K04125 - gmx:100809097 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0388 8 2449533 2452164 Sto13g3725 13 39129032 39131489 CCT
Sto13g3725 13 39129032 39131489 Sto13g3725 13 39129032 39131489 ECH