Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0297 ATGGCCAACTCATCTTCTTTatgcttcttcttccttctttctctcttcattCTCTGCTGTTCAGGAACTCTTGTGGGATTTTCCTATCGTGAAAGAGGGAACGCTGATGATGCTTCAGAACCCGCTGGAATTATATCGTTCCTCAAGCACAACAAGGTTCCCCAATCTCATATTCGTATTTTTGTCACGGATCGTAGGATTTTGAGTATTTTCACAAACTCTCAGCAGTCACTTGATTTCTATCTAAATGAAAGCCTAGTCAGAAACTTCATTAGGTCAAAACCAAATGCAGTTTCATGGATAAAACACCATCTTGTGGATCTTCTTCCGCAAGTAGAAATCAAAAGCATCATAGCTAGTTGTGGCAGTATAGGCCAAAATGAGATACCTTTACTTTTATCTGCTCTGGAATCTATTCATTCAGTTCTCAGAAAGCTTCATATAGGCAGGGAAGTTAAGGTCTCTGTGGCATTTCCACTGTCACTCTTAGAGAAGTTGAAAAGATTACATGGGAATGATCTTAATAGGATTCTTTCCtttataaaagaaacaaattcctTTGTTATGATAGAAGACAGCATTCATGGGGAATTAAGCATGGGGGATCACTTTGTTCAGTCTATTATTAAACGAGCTACTCTCGTTGCTTCTATACTTCCTTACAAAGATGTTCCTATGGTTCTCACAATCAAGAGCCCAGCTATTCCCAGTTCAATGGAAGTAGCTCAATTTAGCGAAAGGGTGTCCAAATATCTTGAAGCAACAAGCACTGAGGGTACTGGTAGGATTATTGCATTATATGCAGAAGTTCATGCTATAGAGACTTTTGAGCAGGAAGAGCTCAAAAGGGAAGAGGAAGAGATCTTTCCTTTGTACAGGAGAGAAATTCTAAGCAAATTCCACATCAGAAGAACTCTAGATGATATCACCAACCCACCAAATACAGTTTACCCCACAAATCCAACTTCACCTACACAAGTTATTACAACCCCAGATACACCAACCATCATCACTGTTCCTTCCACCAATCCTGTCACTGTTTCCCCCACCAATCCGGCTGCAACGCCTGTGACAGTTCCTTCCACAACCCCGGTGCCATTATCTCCAACAAATCCAGCCAATTCCGGGACAGCCCCTATAACAGTTCCAGGGGCGCAACCAGCAACATATTATCCACCCCCATCAGGAAGTGTTCCTGTGGTGAATCCCATTCCACCTCCTGCAAATACTAATGCTCCTGCTACAACGGGGCAGAGCTGGTGTGTGGCGAAGACTGGAGCTTCAGAGACTGCTCTTCAATCAGCATTGGACTATGCTTGTGGAATGGGAGGAGCAGACTGTTCTCAAATCCAGCAGGGCGGCAATTGTTATAATCCAAATTCTCTTCAAAACCATGCTTCTTATGCCTTCAACAGCTACTACCAGAAGAATCCAGCGCCCACAAGTTGTGACTTTGGAGGAGCTGCTTCCCTGGTTAACGTGAATCCAAGCACAGGTTCATGCATTTATccctcatcttcttcctcttcctcatcgTCAACCCCGGTCCCGTTATCACCAATAACTACACCGTCAACACCAATGCCATCTTCACCAACaccaacatcatcatcatcaggaaCAGGCACATCTGGCTATGGTACCCCACCTTCAGTGTTAAATTCAAGCAACCCCGCAGCAGGTATGGGTACCACACCGGTTTTCGGGTCCGAAAGTCCTGGCGAGAATACTGCGTCTTCACATTCAACCATTTTGCAACCGTTTTTAGGTTTCATGGTTGTGGTGATATCGATGGTCTCTGGAAAGCTCAGTATGCGCTCATAA 1824 0.4178 MANSSSLCFFFLLSLFILCCSGTLVGFSYRERGNADDASEPAGIISFLKHNKVPQSHIRIFVTDRRILSIFTNSQQSLDFYLNESLVRNFIRSKPNAVSWIKHHLVDLLPQVEIKSIIASCGSIGQNEIPLLLSALESIHSVLRKLHIGREVKVSVAFPLSLLEKLKRLHGNDLNRILSFIKETNSFVMIEDSIHGELSMGDHFVQSIIKRATLVASILPYKDVPMVLTIKSPAIPSSMEVAQFSERVSKYLEATSTEGTGRIIALYAEVHAIETFEQEELKREEEEIFPLYRREILSKFHIRRTLDDITNPPNTVYPTNPTSPTQVITTPDTPTIITVPSTNPVTVSPTNPAATPVTVPSTTPVPLSPTNPANSGTAPITVPGAQPATYYPPPSGSVPVVNPIPPPANTNAPATTGQSWCVAKTGASETALQSALDYACGMGGADCSQIQQGGNCYNPNSLQNHASYAFNSYYQKNPAPTSCDFGGAASLVNVNPSTGSCIYPSSSSSSSSSTPVPLSPITTPSTPMPSSPTPTSSSSGTGTSGYGTPPSVLNSSNPAAGMGTTPVFGSESPGENTASSHSTILQPFLGFMVVVISMVSGKLSMRS 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0297 607 Gene3D - 414 515 - -
Sto8g0297 607 MobiDBLite consensus disorder prediction 532 581 - -
Sto8g0297 607 MobiDBLite consensus disorder prediction 503 581 - -
Sto8g0297 607 Pfam X8 domain 420 490 IPR012946 -
Sto8g0297 607 MobiDBLite consensus disorder prediction 341 361 - -
Sto8g0297 607 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 144 572 IPR044965 GO:0004553|GO:0005975
Sto8g0297 607 SMART X8_cls 419 503 IPR012946 -
Sto8g0297 607 MobiDBLite consensus disorder prediction 503 519 - -
Sto8g0297 607 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 144 572 - -
Sto8g0297 607 MobiDBLite consensus disorder prediction 341 364 - -
Sto8g0297 607 Gene3D Glycosidases 25 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0297 Sto-Chr8 1929762 1932037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0297 405 506 Glycoside Hydrolase AT2G05790 52.427 7.67e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0297 - - cam:101499863 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0297 8 1929762 1932037 Sto13g3801 13 39573834 39577323 CCT
Sto8g0297 8 1929762 1932037 Sto8g0297 8 1929762 1932037 ECH