Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3801 ATGGAGAGAGCGAGTAAGCTATTAGTGGTCTTAGCCAtggtgctgctgctgctgcttgcTTCTGAGGTTGAAGGAGGAAGGAAGCTAAGGAGCAAGGAGGATCGCCCACAGAGCTTCCTGGGAGGGATTTTTCCAAGCCCGGGCTTCGCAGGCTTTGGGTTTGGGCCGTCGGGCTTTTGCACCTTCCCAGGAGGCTGTACTCCAACCCTACCCATTAACCCAGGATTTCTAGTGGGGTTTTCGTTTCGTGAATCTTTCATACCAGGTGGAGCAATGTCATTCCTGAACCTGAAGCAAAGCAAGATGTCCCTATCTCAGATTGGAATCATAAGAAGAACTTTAGGTGACACAAGCACAACCATAATCACAGTGCCTTCTTCCGCCAATCCAGTGAGTGCTTCTTCCCCCACCAATCCATCCGCAACGCCCATAACAGTTCCTTCCACCAATCCCCCTGTGCCACTAGCATATCCACCCCCATCCTCCTCACCACCTGTTCCACTCATAAATTCTCAACCACCTCCTTCAACACCTGCATCTTCCGCAACAGGACAGAGATGGTGTGTGGCTAAGAGTGGAGCTTCACAATCTGCTCTTCAATCTGCACTTGACTATGCTTGTGGAATGGGGGCTGCCGATTGCTCACAGATACAGCAAGGAGGGCGTTGTTATAATCCCAATACTCTGCAAAACCATGCTTCTTATGCCTTCAACTCCTACTACCAAAAGAATCCCATTCCTACTAGCTGTGACTTCGGAGGCACTGCTTCCTTAGTATGGGAGCCCAGCTTCAGCATTGAATTCAAGTTCTGGAACAGGTTTTACGCCCATTTCCGGGTTGCCAAGCCCGCCTTCTGCAAGTACCACGTCATGGTCGCATTCACCTGCTCTTCGACCTTCTCTTGGCTGCACAATTCTGCTCATATCATTCCTCACTGCAAAATTCACCATCGCCCCAAGACTCCTTCTATGAGAACCTCAATTGCGCTCAACCTATGTGTCTACATTACAAGCTGTGTTCGGGTCAACAACCGTAGAGTATTAGTGTACAACTGA 1056 0.4839 MERASKLLVVLAMVLLLLLASEVEGGRKLRSKEDRPQSFLGGIFPSPGFAGFGFGPSGFCTFPGGCTPTLPINPGFLVGFSFRESFIPGGAMSFLNLKQSKMSLSQIGIIRRTLGDTSTTIITVPSSANPVSASSPTNPSATPITVPSTNPPVPLAYPPPSSSPPVPLINSQPPPSTPASSATGQRWCVAKSGASQSALQSALDYACGMGAADCSQIQQGGRCYNPNTLQNHASYAFNSYYQKNPIPTSCDFGGTASLVWEPSFSIEFKFWNRFYAHFRVAKPAFCKYHVMVAFTCSSTFSWLHNSAHIIPHCKIHHRPKTPSMRTSIALNLCVYITSCVRVNNRRVLVYN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3801 351 MobiDBLite consensus disorder prediction 145 174 - -
Sto13g3801 351 Pfam X8 domain 187 257 IPR012946 -
Sto13g3801 351 SMART X8_cls 186 288 IPR012946 -
Sto13g3801 351 MobiDBLite consensus disorder prediction 126 183 - -
Sto13g3801 351 MobiDBLite consensus disorder prediction 126 144 - -
Sto13g3801 351 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 114 260 IPR044965 GO:0004553|GO:0005975
Sto13g3801 351 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN 114 260 - -
Sto13g3801 351 Gene3D - 180 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3801 Sto-Chr13 39573834 39577323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3801 181 273 Glycoside Hydrolase AT5G55180 52.632 6.76e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3801 - - ccaj:109798054 154.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0297 8 1929762 1932037 Sto13g3801 13 39573834 39577323 CCT
Sto13g3801 13 39573834 39577323 Sto13g3801 13 39573834 39577323 ECH