Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0273 ATGGCGCCTGACATCACCACCGCTGCTGTTAACGCCACCGCGGCACAAGCCAAGGCCGCCGGGACACTAAACCGTGCGTACGTGACTTTTCTTGCCGGCGACGGTGACTACGTGAAGGGCGTGGTGGGGTTAGCGAAAGGTCTGAGGAAGGTGCAGAGCATGTACCCGCTGGTGGTTGCTGTGTTGCCCGATGTTCCCGAGGAGCACCGTAAGATCCTCATCTCCCAAGGCTGCATCGTCAAGGAGATAGAGCCAGTCTACCCTCCCCCTAACCAAGCCCAGTTTGCCATGGCCTACTATGTCATCAATTACTCCAAACTCCGTATTTgggagTTCGTGGAGTACAGCAAGATGATATATTTAGACGGTGACATTCAAGTTTTTGGGAACATCGACCACCTTTTCGATCTTCCGAATGGTTATTTCTATGCGGTGATGGACTGTTTTTGCGAGAAGACATGGTCTAGCAGCCCCCAGTACCAGATAGGGTACTGCCAGCAGTGCCCTGACAAGGTTCAGTGGCCTTCCGATATGGGACCCAAGCCACCACTCTACTTCAACGCTGGGATGTTCGTCTACGAGCCTAATCTTTCCACTTACCACGACCTCCTTAAGACCCTTCAAGTCACTACGCCAACATCTTTTGCTGAACagGACTTCCTGAACATGTACTTTAGGGACAAATATAGACCCATATCCAATATGTACAACCTTGTGCTGGCCATGTTGTGGCGTCACCCTGAGAATGTTCAGCTTGACAATGTCAAAGTTGTTCACTATTGTGCTGCTGGATCAAAACCGTGGAGGTTTACTGGGAAAGAAGAGAATATGGAGAGGGAGGATATCAAGATGCTAGTGAAAAAGTGGTGGGATGTTTATGAAGACGAGACTTTGGACTATGAATATGCAGTGGATGTGGAACGTTTGAAGGGGGCATTAACCGAGGCTGCTGGGATTCAATATGTTCCAGCACCTTCCGCCGCCTAG 987 0.4985 MAPDITTAAVNATAAQAKAAGTLNRAYVTFLAGDGDYVKGVVGLAKGLRKVQSMYPLVVAVLPDVPEEHRKILISQGCIVKEIEPVYPPPNQAQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFGNIDHLFDLPNGYFYAVMDCFCEKTWSSSPQYQIGYCQQCPDKVQWPSDMGPKPPLYFNAGMFVYEPNLSTYHDLLKTLQVTTPTSFAEQDFLNMYFRDKYRPISNMYNLVLAMLWRHPENVQLDNVKVVHYCAAGSKPWRFTGKEENMEREDIKMLVKKWWDVYEDETLDYEYAVDVERLKGALTEAAGIQYVPAPSAA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0273 328 PANTHER GALACTINOL SYNTHASE 2 1 328 - -
Sto8g0273 328 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 297 IPR029044 -
Sto8g0273 328 CDD GT8_Glycogenin 25 295 - -
Sto8g0273 328 Pfam Glycosyl transferase family 8 29 270 IPR002495 GO:0016757
Sto8g0273 328 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 23 301 IPR029044 -
Sto8g0273 328 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0273 Sto-Chr8 1793152 1794401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0273 1 328 Glycosyltransferase AT1G56600 74.852 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0273 K18819 - gmx:100800249 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0273 8 1793152 1794401 Sto13g3808 13 39610567 39611739 CCT
Sto8g0273 8 1793152 1794401 Sto8g0273 8 1793152 1794401 ECH