Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3808 ATGGCTCCTGATATAGCAACGGCCGCTGCCAACGCCAACGCCAACGCCAGGCAAGCGAATGCGAAGGGAATGGTGGCGGGGCGAGCCTTCGTGACGTTCCTAGCCGGAAACGGTGACTACGTGAAGGGTGTGGTGGGTCTAGCCAAAGGTCTTAGGAAGGTGGAGAGTAAATACCCTCTTGTGGTGGCTGTTCTTCCCGATGTTCCTGCCGAGCACCGTCAAATTCTCATCTCTCAAGGCTGCATCGTCCGAGAGATTGAGCCGGTTTATCCTCCAGCCAACCAGACACAGTTCGCCATGGCCTATTACGTCATCAACTACTCCAAGCTTCGTATCTGGGAGTTTGTGGAGTATTCCAAGATGATCTACTTGGATGGAGATATCCAAGTATTTCACAACATTGACCACCTTTTTGACATGCCAGACGGTTACTTTTATGCTGTCATGGATTGCTTCTGCGAGAAAACCTGGAGTCACAGCCCGCAGTTCCAGATCGGGTACTGCCAGCAGTGTCCCGATAAGGTGGAGTGGCCCACTCACAAAGGACCAAGGCCACCTTTGTATTTCAATGCTGGTATGTTCGTTTTCCAGCCCAAACTTAGCATATACCATGACCTCCTCACCACTCTCCAACTCACCACTCCAACTTCCTTCGCCGAGcagGATTTTCTCAACATGTACTTCAAGGACAAGTACAGACCCATACCCAACGTTTACAATCTTGTGCTGGCCATGCTATGGCGGCATCCGGAGAACGTGGAGCTTGACAAAGTCAAAGTGGTTCACTACTGTGCTGCTGGGTCTAAGCCATGGAGGTTCACTGGAAAGGAGGAAAACATGGAGAGACAAGACATCAAGATGCTGGTTAAGAAGTGGTGGGATATATACGAGGATGAGAGTTTGGACTATGTGAATGCTGTCAACGTGGAGAATATTAAGGCTGCCTATTCCGAGGCTGCTGGTGTTGCATTTGTCCCTGCACCATCCGCTGCCTAG 996 0.505 MAPDIATAAANANANARQANAKGMVAGRAFVTFLAGNGDYVKGVVGLAKGLRKVESKYPLVVAVLPDVPAEHRQILISQGCIVREIEPVYPPANQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFHNIDHLFDMPDGYFYAVMDCFCEKTWSHSPQFQIGYCQQCPDKVEWPTHKGPRPPLYFNAGMFVFQPKLSIYHDLLTTLQLTTPTSFAEQDFLNMYFKDKYRPIPNVYNLVLAMLWRHPENVELDKVKVVHYCAAGSKPWRFTGKEENMERQDIKMLVKKWWDIYEDESLDYVNAVNVENIKAAYSEAAGVAFVPAPSAA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3808 331 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 315 - -
Sto13g3808 331 SUPERFAMILY Nucleotide-diphospho-sugar transferases 31 301 IPR029044 -
Sto13g3808 331 Pfam Glycosyl transferase family 8 32 273 IPR002495 GO:0016757
Sto13g3808 331 PANTHER GALACTINOL SYNTHASE 1 1 315 - -
Sto13g3808 331 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 26 306 IPR029044 -
Sto13g3808 331 CDD GT8_Glycogenin 28 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3808 Sto-Chr13 39610567 39611739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3808 1 331 Glycosyltransferase AT1G56600 72.434 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3808 K18819 - gmx:100800249 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0273 8 1793152 1794401 Sto13g3808 13 39610567 39611739 CCT
Sto13g3808 13 39610567 39611739 Sto13g3808 13 39610567 39611739 ECH