Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0193 ATGGCACACCCTCCACAAACCCATATGGTCCCCGATTCCCAAACACAAGATTCCTATTCCGGCGTCTCTCAACCCGATGAAATTCCTCCGGTTCAAAACCCTAGTTCTCCCAATCGGATGCCGAATTCGGATGCAACCGAAATTCCGACCATCCTAGACCTTTCATTCAATCAGGACTCCGGTTGCTTCGCCACCGGAACCAATTATGGTTTCCGTATTTTCAACTGCGACCCGTTCCGCGAGTTATTTCGTCGGGATTTTGGTCCCGGTGGTGGAATTGGATTGGTTGAGATGTTGTTCCGGTGCAACATACTTGCCTTCGTCGGCGGCGGGACCGACCCTTTGTATCCAATCAATAAAGTCATGATTTGGGACGATCATCAGTCCCGGTGCATCGGCGAGCTTTCGTTTCGATCTGAGGTAAAAGGGGTTCGTCTTAGAAGGGACCGGATTGTTGTGGTTCTGATGCACAAGATATTAGTGTACAATTTCGACGATCTTAAAGTTTTGCATCAAATCGAGACATATGCGAACCCTAAGGGACTTTGTGAAGTCTCCCATGTTTCAGGGACAATGGTTTTGGTTTGCCCGGGATTGCAGAAGGGTCAGGTAAGAATCGAACATTATGCGTCAAAGCGGACCAAATTTATAATGGCGCACGATTCCAGAATTGCTTGTTTCGCGCTAACGCAAGATGGGCGCTTGCTTGCCACCGCGAGCAGTAAGGGCACTCTGGTTAGGGTTTTTAATACTACGGATGGTTCATTGCTCCAAGAGGTACGGAGAGGTGCAGACCGAGCAGAGATACAGAGCCTTGCGTTCTCTGCTACTGCTCAGTGGCTGGCTGTCTCAAGTGACAAAGGAACTGTTCATGTCTTCAACCTAAAGGTTGATTCAGGATTGTTGGGGCATCAAAGGTCACACAGTGCATCTGAGTCTAGTCCCTCTAGCCCCTTGCCAGTTTCGTCTCTTTCATTTATCAGAGGTGTTCTACCTAAGTATTTTAGCTCAGAGTGGTCAGTGGCCCAGTTCCGCTTGAATGAAGGTTCACAATATGTTGTTTCCTTTGGTCACCAGAAGAACACCATCGTAATACTTGGCATGGATGGCAGCTTTTATCGATGCCAGTTTGATCCCTTAGTTGGTGGAGAAATGACTCAActtgaatattataattttctcaAGCCAGAACAGACATTCTAG 1203 0.4713 MAHPPQTHMVPDSQTQDSYSGVSQPDEIPPVQNPSSPNRMPNSDATEIPTILDLSFNQDSGCFATGTNYGFRIFNCDPFRELFRRDFGPGGGIGLVEMLFRCNILAFVGGGTDPLYPINKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLMHKILVYNFDDLKVLHQIETYANPKGLCEVSHVSGTMVLVCPGLQKGQVRIEHYASKRTKFIMAHDSRIACFALTQDGRLLATASSKGTLVRVFNTTDGSLLQEVRRGADRAEIQSLAFSATAQWLAVSSDKGTVHVFNLKVDSGLLGHQRSHSASESSPSSPLPVSSLSFIRGVLPKYFSSEWSVAQFRLNEGSQYVVSFGHQKNTIVILGMDGSFYRCQFDPLVGGEMTQLEYYNFLKPEQTF 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0193 400 MobiDBLite consensus disorder prediction 8 29 - -
Sto8g0193 400 Pfam WD domain, G-beta repeat 263 294 IPR001680 GO:0005515
Sto8g0193 400 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 31 400 - -
Sto8g0193 400 Gene3D - 45 372 IPR015943 GO:0005515
Sto8g0193 400 PANTHER AUTOPHAGY-RELATED PROTEIN 18A-LIKE ISOFORM X1 31 400 - -
Sto8g0193 400 MobiDBLite consensus disorder prediction 1 44 - -
Sto8g0193 400 SUPERFAMILY WD40 repeat-like 49 309 IPR036322 GO:0005515
Sto8g0193 400 SMART WD40_4 210 250 IPR001680 GO:0005515
Sto8g0193 400 SMART WD40_4 253 294 IPR001680 GO:0005515
Sto8g0193 400 SMART WD40_4 41 75 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0193 Sto-Chr8 1322097 1324280 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0193 K22991 - gmx:100787427 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3875 13 40013081 40015762 Sto8g0193 8 1322097 1324280 ECH
Sto8g0193 8 1322097 1324280 Sto8g0193 8 1322097 1324280 ECH