Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1678 ATGGCGCTGGAAGCAAAGGAAAAAATAGGATTCATATATGGATTGATTCAAACCCTTGTAGATGCTGCTGAGCAAAGGAAGTGGAAATCGGTGGACAGTATGATAAAATCCTGGATTATTAATTCAATATCCAAGGATTTTTCGGACACCTTTGTCTATTGCCTCACGGCTAAAGATCTCTGGAGCACGTTAGAAGAAAGGTTTGGGGCAAGCAATGCTCCCCAAATGTACCATATACAGAGGCAGGCCACCTCTCTTAATCAAGGCGGCAATTTTGTCACCGTATACTACAATAAGCTACACCGATGTTGGGACGAAATGGACAGAGTCATGCCCATGCCCACATGCACATGTGGCAAGTGTTCTTGTGGGCTGAAGAAAAGAGTCTCAGACATGATGGCATCGACTAAGATTCTACAATTTCTGATGGGTTTAAATCCCACTTTTGATGTAGCGAGAACCCAGATTTTAAATCTTGATCCCTTGCCCACGGTTAACAAAGCCTTCTCCATGATAGTAACAGATGAAGCACAAAGGGAAATAAACATGGCCTATTCAGGAACTAATGATGCAACCAGTGCAATGATGGCAAAGGCAAACCTAGGAAAGAATGAAGGAGCCAACTTCAAGAGGAAAGATCCATCCAAGAAAGACAAATATTGTGACCACTATCATGAAAAGGCACAACAAGATCCACTGGAGCTTCCAACACAAGCAGACATTCGTGAACCTACTGATATGACAAGAGATGAGGTGCAAGATCTGAACCTAGATGAACAACAAGATTATGACCATCAAGAAGCTGAGATTAACCCTCCTGTTCAAGCTAGAGTTGGAACCAGGAATAGAAGGGCACCAGTTTGGCTGCAAGACTATGTTTGTGTTGCTAAGAATTCTGAACCGTATGCTGATCGAGTTGCGATGGTTGCTATATATAATCTAGACGATATATATGGTGTTGATGAGAATGTGGCCCTCGGTTTCGCCGCCGTCATCGTGCAGTGCTGCCCGCCGTCCGACAGGGCGGCGCTGCTCGCCTTCAAGGCGGCGCTCCACGAGCCCAACTTAGGAATCTTCAACTCCTGGACCGGCGCCGACTGTTGCAACAAGTGGTACGGCGTGAGCTGCGACCAGCACACCCGCCGCGTCGCCGACATCAACCTCCGCGGCGAGTCCGAAGACCCGCTGTTCCAGAAGGCCCACCGCACCGGGTACATGACCGGCTACATCTCCCCCGCCATCTGCAAGCTCACGCGCCTCTCCAGCATCACCATCGCCGACTGGAAAGGGATCTCCGGCGAGATCCCCCGCTGCATCACCTCCCTGCGTTTCCTCCGCATCGTCGACCTCATCGGGAACCGCATCTACGGCCCCATCCCCGCCGACATCGGCCGCCTCCACCGCCTCACCGTCCTCAACGTCGCCGACAATCTCATCTCCGGCGAGATCCCCCCTTCCCTCACCAACCTCTCAAGCCTCATGCACCTCGACCTCCGCAACAACCGAATCTCCGGCTCCCTCCCTCGAACCTTCGGGAGCCTCACAATGCTGAGCCGAGCTCTGCTCAGCGGGAACCAACTAATCGGAACCATCCCGACTTCCATGTGCACAATTTATCGTCTCGCTGACGTGGACTTATCTCGCAACAAAATATCGGGGCCCATACCCGAGTGCGTCGGGCGAATGGGCGTCCTGTCCACGCTCAACTTGGATGGGAACAAGTTGTGGGGCCAGATCCCTCAGAGCTTGTTCACTTCGGGGATTAGTGATTTGAATTTGAGCAGAAACGGGTTGACCGGAACCATACCCGACGTATTCGGGGCGAGGTCGTATTTCACGGTGCTTGATTTGTCGTATAACAGTCTCAAGGGTGCGATTCCAGCGTCAATCTCTACGGCGTCGTTTATAGGTCACTTGGATTTGAGTCACAACCATTTGTGTGGGAGAATCCCGAGTGGCTCACCCTTTGATCATCTAGAAGCGTCGTCGTTTGTTTATAATGATTGTCTCTGTGGGAAGCCACTCACACCTTGCAAGTAG 2040 0.5108 MALEAKEKIGFIYGLIQTLVDAAEQRKWKSVDSMIKSWIINSISKDFSDTFVYCLTAKDLWSTLEERFGASNAPQMYHIQRQATSLNQGGNFVTVYYNKLHRCWDEMDRVMPMPTCTCGKCSCGLKKRVSDMMASTKILQFLMGLNPTFDVARTQILNLDPLPTVNKAFSMIVTDEAQREINMAYSGTNDATSAMMAKANLGKNEGANFKRKDPSKKDKYCDHYHEKAQQDPLELPTQADIREPTDMTRDEVQDLNLDEQQDYDHQEAEINPPVQARVGTRNRRAPVWLQDYVCVAKNSEPYADRVAMVAIYNLDDIYGVDENVALGFAAVIVQCCPPSDRAALLAFKAALHEPNLGIFNSWTGADCCNKWYGVSCDQHTRRVADINLRGESEDPLFQKAHRTGYMTGYISPAICKLTRLSSITIADWKGISGEIPRCITSLRFLRIVDLIGNRIYGPIPADIGRLHRLTVLNVADNLISGEIPPSLTNLSSLMHLDLRNNRISGSLPRTFGSLTMLSRALLSGNQLIGTIPTSMCTIYRLADVDLSRNKISGPIPECVGRMGVLSTLNLDGNKLWGQIPQSLFTSGISDLNLSRNGLTGTIPDVFGARSYFTVLDLSYNSLKGAIPASISTASFIGHLDLSHNHLCGRIPSGSPFDHLEASSFVYNDCLCGKPLTPCK 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1678 679 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 329 678 - -
Sto7g1678 679 Pfam Leucine rich repeat N-terminal domain 338 377 IPR013210 -
Sto7g1678 679 Pfam Retrotransposon gag protein 35 147 IPR005162 -
Sto7g1678 679 SUPERFAMILY L domain-like 335 678 - -
Sto7g1678 679 Gene3D Ribonuclease Inhibitor 334 402 IPR032675 -
Sto7g1678 679 SMART LRR_typ_2 562 586 IPR003591 -
Sto7g1678 679 SMART LRR_typ_2 466 489 IPR003591 -
Sto7g1678 679 SMART LRR_typ_2 490 513 IPR003591 -
Sto7g1678 679 Gene3D Ribonuclease Inhibitor 403 679 IPR032675 -
Sto7g1678 679 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 329 678 - -
Sto7g1678 679 Pfam Leucine rich repeat 589 646 IPR001611 GO:0005515
Sto7g1678 679 Pfam Leucine rich repeat 468 527 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1678 Sto-Chr7 21796064 21808008 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1678 379 678 Receptor kinase-like Gene Family AT5G46330 34.718 1.70e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1678 - - gmx:100804739 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1678 7 21796064 21808008 Sto7g1678 7 21796064 21808008 ECH
Sto12g0094 12 629305 630966 Sto7g1678 7 21796064 21808008 ECH