Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0094 ATGGCTGCATTTTGCTTCATAACCGCTTTATTGCTGGCCGTTAGCTTGGGCGTCCACTGCTCCTGCCCACCGTCGGACAGGGCGGCGCTCCTCGCCTTCAAGGCCGCTCTCCCTCAACGCCACTTGTCAGTTTTCGATTCCTGGACCGGCAATGACTGCTGCCGCAACTGGTACGGCGTCAACTGCGACCAGCAGTCCGGCCGCGTCGCAGATATCAGTCTCCGCGGTGATTCCCTCCCGTCAAGCTCCGCCGCCTCAACCACCGGATCAATCTCGCCCCAAATCTGCAAGCTAACTCGACTGTCGAGCATCATCATCTCCGATTGGGAGGGTCTTGGGGGTCAGATCCCAGGTTGCATATCGTCCTTGGTTTTCCTTCGGATCATCGACCTCAACGGAAACAGCATCACGGGTGTGATTCCGGCCGACATTGGTAAGCTGAGCGAGCTGATCGTACTGAACTTGGCGGATAATTCAATTTCTGGAACAATTCCAGAATCGCTGACCAACTTGGGAAACTTGAAGCACCTAGACCTGAGAAATAACAAAATATCAGGGGCGATTCCGAGGAGCTTGGGGAAGATGAAAATGGTGAGCCGGCTTTTAGTGGGGAGGAACGAGATTAGCGGGGACATTCCGAGTTCCATAGGTGGAGTGTATCGTCTTGTGGATTTGGATTTGTCTGAGAATAAGATATCGGGGGCTATTCCAGAGTTGCTGAGTAAATTGAGGGTTCTTGGGACGGTGAATGTAGGTGGGAATAAGCTTAGGGGAAGAATCCCAGAGGGGTTATTAAAGTCGGGAATAAGCTATTTGAACATGAGTCACAACTATCTGGAAGGGAATATTCCGGACGTTTTTGGGGGCAGTTCTTATTTCACGGTGCTGGACTTTTCTTACAACAATCTCAAGGGTAGCCTCCCACGCTCCATGAACTCCGCTTCCTATATTGGCTTCTTGGATGTGTCTCATAACCATCTCTGTGGCTCCATTCCCACCGGCTCACCCTTTGACCATCTCGACGACTCCTCCTTTCTTTTCAACGACTGCCTCTCTCTCCACTATTTCCGACTGGAACGCCATCTCCCATTGTATTCCTTCCTCCCCACCACGCTCCCAAACAATGCTCTCCATGGGCCCATTCCCTGCAGGGACATTGCATCCCCAGGATATCCACATTATGGGCTTGCGCTTCTGATAAGGGGGCCCATTCCGGAATCGCCGGGTTTTGGATACACTCAAGTTGAACTAGTATAA 1257 0.5187 MAAFCFITALLLAVSLGVHCSCPPSDRAALLAFKAALPQRHLSVFDSWTGNDCCRNWYGVNCDQQSGRVADISLRGDSLPSSSAASTTGSISPQICKLTRLSSIIISDWEGLGGQIPGCISSLVFLRIIDLNGNSITGVIPADIGKLSELIVLNLADNSISGTIPESLTNLGNLKHLDLRNNKISGAIPRSLGKMKMVSRLLVGRNEISGDIPSSIGGVYRLVDLDLSENKISGAIPELLSKLRVLGTVNVGGNKLRGRIPEGLLKSGISYLNMSHNYLEGNIPDVFGGSSYFTVLDFSYNNLKGSLPRSMNSASYIGFLDVSHNHLCGSIPTGSPFDHLDDSSFLFNDCLSLHYFRLERHLPLYSFLPTTLPNNALHGPIPCRDIASPGYPHYGLALLIRGPIPESPGFGYTQVELV 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0094 418 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Sto12g0094 418 Gene3D Ribonuclease Inhibitor 85 360 IPR032675 -
Sto12g0094 418 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 5 352 - -
Sto12g0094 418 Gene3D Ribonuclease Inhibitor 19 84 IPR032675 -
Sto12g0094 418 Pfam Leucine rich repeat 126 184 IPR001611 GO:0005515
Sto12g0094 418 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 5 352 - -
Sto12g0094 418 SUPERFAMILY L domain-like 20 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0094 Sto-Chr12 629305 630966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0094 54 387 Miscellaneous Gene Families AT4G39270 35.294 8.57e-45 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0094 - - csv:101208074 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0094 12 629305 630966 Sto12g0094 12 629305 630966 ECH
Sto12g0094 12 629305 630966 Sto7g1678 7 21796064 21808008 ECH