Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1564 ATGTTGCGTGCTATAGTGGGAAAGAATCTAAAAACTTGGGAGGATTCTTTGCTATTCATTGAGTTTGCATATAATCGTGTTGTACATTCTTCCATAGGTTTTTCACCATTTCAAATTGTGTATGGTTTTAATCCACTAAGTGTGTTATATTTGATGCCTTTACCTTTGAGTAAAATTGCTAGCATAGACGGAAAGAAGAAGGTTGAAGTGGTTAAAGCAATACATGAAAAAGCACGTGAACATATTGAAAAGAAGAATCGCATATATGCTCAAAAGGCCAATAAAGGCATGAAGGAAGAGCTGAGTTTACCTCCAAGACCAATTACAAGATCAAGAGCTAAGAAGTTCAAGGAATCACTCCAAATTTATGTGGGAAAATTATTGGAGCATATGGAGGATCAAGACTCCATCAAGGCACAAGAGATCATACATACTCAGTTGGAAGACATAAGTGATAGAAGCAATGGAGATGTAGCCATCGACTCATATCATCGTTACAAGGAAGATATTGGAATTATGAAGTCTACGAATATGGATGCTTACAGATTCTCCATCTCTTGGTCCTGGattctgccatGGGTACAACCATTTGTGACTCTTTTCCATTGGGATCTTCCCCAAGCCTTACAAGATGAGTATGATGGGTTCTTCAACTCTAGTATTATAAATGACTTTGAGGACTATGCAGAACTTTGCTTCAAAGAATTTGGAGATAGAGTGAAGCATTGGATAACATTGAATGAGCCATGGAGTTATAGTTTGGGTATTTATACATCGACAAAACCCTATTTGGTCTCTCACTATCAACTTCTTACTCATACAGCCGTTGTCAAACTCTATAAGGCTAAGTATCAGGTGTCACAAGGGGGACTAATAGGCATTGCTTTGGTCTCGAACTGGTTTTTGCCCTTCTCAAATAACAAATTGGACCATCGTGCTGCAAGACGAGCCCTTGACTTCATGGTTGGATGGTTTATGGAACCACTAACAAAAGGAGAATACCCAAAAAGCATGCAATCTTTGGTGGGAAGCCGATTACCAAAGTTCTCCAAACAGCAATCCAAGCTTCTTATGAATGCCTCATTTGATTTCATTGGCATAAACTACTACACCTCTAACTTTGCTGCTCATGCACCTCACTTGCGTAATCCTTCTTCCGAACCTACCTATTTCACTGATCGTCTTGTCAATCTTACAACCGAGCGTAATGGGATACCAATTGGACCAAGGGCTACTTCAGATGGGCTATATGTTTATCCAAGAGGCATTCACCAACTACTGCTCTACATCAAGAGAAAGTACAACaaccctttaatttatattactgaAAATGGCATCTATGAGATAAATGATCCAACACTTTCACTTAAGGAAGCCCTCATGGATACCTATAGGATTGATTACTGTTATCGTCATCTTTATTATCTTCAACTTGCAATCAAGGATGGCGTGAATGTAAAAGGATATTTCGCATGGTCATTATTGGACAACTTTGAATGGGGATCAGGCTATACAATGCGTTTTGGAATCAACTTTGTAGATTACAAAAATGGCTTGAAAAGGCATCAAAAGCTCTCTGCCCATTGGTTTAGGAATTTCTTACGCAAGTAG 1611 0.3824 MLRAIVGKNLKTWEDSLLFIEFAYNRVVHSSIGFSPFQIVYGFNPLSVLYLMPLPLSKIASIDGKKKVEVVKAIHEKAREHIEKKNRIYAQKANKGMKEELSLPPRPITRSRAKKFKESLQIYVGKLLEHMEDQDSIKAQEIIHTQLEDISDRSNGDVAIDSYHRYKEDIGIMKSTNMDAYRFSISWSWILPWVQPFVTLFHWDLPQALQDEYDGFFNSSIINDFEDYAELCFKEFGDRVKHWITLNEPWSYSLGIYTSTKPYLVSHYQLLTHTAVVKLYKAKYQVSQGGLIGIALVSNWFLPFSNNKLDHRAARRALDFMVGWFMEPLTKGEYPKSMQSLVGSRLPKFSKQQSKLLMNASFDFIGINYYTSNFAAHAPHLRNPSSEPTYFTDRLVNLTTERNGIPIGPRATSDGLYVYPRGIHQLLLYIKRKYNNPLIYITENGIYEINDPTLSLKEALMDTYRIDYCYRHLYYLQLAIKDGVNVKGYFAWSLLDNFEWGSGYTMRFGINFVDYKNGLKRHQKLSAHWFRNFLRK 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1564 536 SUPERFAMILY (Trans)glycosidases 143 535 IPR017853 -
Sto7g1564 536 Gene3D - 1 87 IPR036397 GO:0003676
Sto7g1564 536 PRINTS Glycosyl hydrolase family 1 signature 361 375 IPR001360 GO:0004553|GO:0005975
Sto7g1564 536 PRINTS Glycosyl hydrolase family 1 signature 439 447 IPR001360 GO:0004553|GO:0005975
Sto7g1564 536 PRINTS Glycosyl hydrolase family 1 signature 462 473 IPR001360 GO:0004553|GO:0005975
Sto7g1564 536 PRINTS Glycosyl hydrolase family 1 signature 483 500 IPR001360 GO:0004553|GO:0005975
Sto7g1564 536 PRINTS Glycosyl hydrolase family 1 signature 507 519 IPR001360 GO:0004553|GO:0005975
Sto7g1564 536 Pfam Glycosyl hydrolase family 1 194 535 IPR001360 GO:0004553|GO:0005975
Sto7g1564 536 Pfam Glycosyl hydrolase family 1 148 192 IPR001360 GO:0004553|GO:0005975
Sto7g1564 536 PANTHER GLYCOSYL HYDROLASE 142 192 IPR001360 GO:0004553|GO:0005975
Sto7g1564 536 PANTHER GLYCOSYL HYDROLASE 194 535 IPR001360 GO:0004553|GO:0005975
Sto7g1564 536 Gene3D Glycosidases 127 536 - -
Sto7g1564 536 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 194 535 - -
Sto7g1564 536 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 142 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1564 Sto-Chr7 20388860 20395047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1564 148 534 Glycoside Hydrolase AT5G44640 46.560 4.53e-133 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1564 - K01188 var:108339449 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1564 7 20388860 20395047 Sto7g1564 7 20388860 20395047 ECH
Sto12g0074 12 502342 504797 Sto7g1564 7 20388860 20395047 ECH