Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0074 ATGGACATGATGAGGAATGGTAGTGCTTCTGTCAATCGAAGCAACTTCCCAGAAGGTGCAGCCAATGCTGGAGGCAGAGGACCAAGTATATGGGATGCTTTCACTCATAAATATCCAGaGAAGATAAAGGACAGAAGTAACGGAGACATGGCTGCGGATCAATATCATCGTTACAAGGAAGATGTTGCGTTGATGAAAGACATGAACTTGGATTCCTATAGACTCTCCATCTCTTGGCCCAGAATCCTGCCCAAAGGAAAGCTCAGCGGAGGTGTGAACAAGGAAGGAATCAACTACTACAACAATCTCATCAACGAGCTTCTAGCCAACGGTATAGAACCATTTGTGACCATTTTTCATTGGGATCTTCCATTGAGCTTGGAGGAAGAATATGGTGGTTTTTTAAGCcccaaaataatAAATGATGTTGTGGATTATGCGGAGTTATGTTTCAAGGAATTCGGAGATAGAGTGAGACATTGGATAACAATAAACGAAGCATGGACTTACAGCGTTTACGGCTATGGGGACGGAGAGCTTGCCCCAGGAAGATGCTCTCCCTCTCTGAACCTTAATTGTTTGGGCGGAGATTCCGGCACCGAGCCCTACACTGTGGCCCACCACCTCTTACTCTCTCATGCTTCTATGGTTAAGCTGTACAAAACCAAGTTTGAGGCATCTCAAAAGGGAGAGATAGGGATAGCACTGGCGTCGAATTGGATAGTCCCATTCTCTGATTCCCAATTGGACTATGAAGCCGCAGAAAGAAGCCGTGAGTTTATGTATGGCTGGTTTTTGGAACCGTTGGTTAGAGGAAAATACCCAAAATCTATGAGACGTTTGGTTGGACGGCGATTGCCCAAGTTCACACCACAGGAGAGGACACTAATCATTGGCTCCTTCGATTTCATTGGATTAAATTTCTACACCACCAATTATGCTCTCTATGCTCCTCAATTTCTCAATGCCTCTCATACCTGTCTCACTGATTCCCTTGCTCAACTCTCATCTCATCCAAACAACAATAATCCTATTGCTCCTAATGGATTAAATGGTTATCCAAGAGGAATTCGAGAATTACTGCTCTATGTCAACTCCAACTACAACAATCCTATCATCTACATCACTGAAAATGGTATGGATGATTACCAAGATGCAAAAGTGCCAGTCGACCAAATTCTCGCAGATACATCTAGAATTGATTATCTTCAAAACAATCTCTATTATCTTAACACTGCAATAAGGGATGGTGTGAAGGTGAAAGGTTGTTTTGCATGGTCACTGTTGGATAACTTTGAATGGAGTTCAGGACATACCAATCGATTTGGGCTTGTGTTTGTGGACTATAATAATGACCTCCAACGATTTCCAAAACTCTCCGCTGATTGGTTCAAGAATTTCCTCCGAACCAATGTTAGACCTGCACATGCAATTGTATGA 1440 0.4271 MDMMRNGSASVNRSNFPEGAANAGGRGPSIWDAFTHKYPEKIKDRSNGDMAADQYHRYKEDVALMKDMNLDSYRLSISWPRILPKGKLSGGVNKEGINYYNNLINELLANGIEPFVTIFHWDLPLSLEEEYGGFLSPKIINDVVDYAELCFKEFGDRVRHWITINEAWTYSVYGYGDGELAPGRCSPSLNLNCLGGDSGTEPYTVAHHLLLSHASMVKLYKTKFEASQKGEIGIALASNWIVPFSDSQLDYEAAERSREFMYGWFLEPLVRGKYPKSMRRLVGRRLPKFTPQERTLIIGSFDFIGLNFYTTNYALYAPQFLNASHTCLTDSLAQLSSHPNNNNPIAPNGLNGYPRGIRELLLYVNSNYNNPIIYITENGMDDYQDAKVPVDQILADTSRIDYLQNNLYYLNTAIRDGVKVKGCFAWSLLDNFEWSSGHTNRFGLVFVDYNNDLQRFPKLSADWFKNFLRTNVRPAHAIV 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0074 479 MobiDBLite consensus disorder prediction 1 24 - -
Sto12g0074 479 PANTHER GLYCOSYL HYDROLASE 16 473 IPR001360 GO:0004553|GO:0005975
Sto12g0074 479 PRINTS Glycosyl hydrolase family 1 signature 300 314 IPR001360 GO:0004553|GO:0005975
Sto12g0074 479 PRINTS Glycosyl hydrolase family 1 signature 373 381 IPR001360 GO:0004553|GO:0005975
Sto12g0074 479 PRINTS Glycosyl hydrolase family 1 signature 396 407 IPR001360 GO:0004553|GO:0005975
Sto12g0074 479 PRINTS Glycosyl hydrolase family 1 signature 417 434 IPR001360 GO:0004553|GO:0005975
Sto12g0074 479 PRINTS Glycosyl hydrolase family 1 signature 441 453 IPR001360 GO:0004553|GO:0005975
Sto12g0074 479 Pfam Glycosyl hydrolase family 1 18 471 IPR001360 GO:0004553|GO:0005975
Sto12g0074 479 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 16 473 - -
Sto12g0074 479 Gene3D Glycosidases 11 477 - -
Sto12g0074 479 SUPERFAMILY (Trans)glycosidases 17 469 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0074 Sto-Chr12 502342 504797 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0074 1 464 Glycoside Hydrolase AT5G42260 49.896 3.30e-170 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0074 - K01188 gmx:100812431 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0074 12 502342 504797 Sto12g0074 12 502342 504797 ECH
Sto12g0074 12 502342 504797 Sto7g1564 7 20388860 20395047 ECH