Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1505 ATGGGAGTGAAGGTGGTAATGAGCGTGTTGGCTCTTATAGCTATCTCGTCCCTTTCTTTGATAGAAGCAACACAACTAACCGCACCCATTCTTGACGTTTCATATCTCAATCTCAATCGAAGCTCTTTCCCCCATGGCTTCCTCTTCGGAACCGCATCCGCTTCCTACCAGTACGAAGGTGCAGCAAGGGAAGGTGGTAGAGGACCTAGTATCTGGGATTACTTCACTCACAAATACCCTgaaaagataaaggatcgGAGCAACGGAGATGTAGCCAACGATGAATATCATCACTACAAGGAAGATGTGGGGATCATGAAGTATATGAATTTGGATGCTTACAGATTCTCCATATCTTGGTCTAGAATACTGCCAAGCTTGACGCCATTTGTGACCCTTTTCCATTGGGATCTTCCGCAAGCCTTAGAAACTGAGTATGGTGGCTTTTTAAGCCCTCAGATTGTAAAGGACTACGAGGACTACGTGAAAGTTTGCTTTCAAGAATTTGGAGATAGGGTGAAGCATTGGATAACATTAAATGAGCCATGGACTTACAGCAATAATGGGTATGCGACGGGGCAGTTGGCTCCGGGTCGATGCTCTAATTGGCTCAACAACAATTGCACCGGCGGCGATTCTGGAACTGAGCCTTATTTGGTTGCTCACCATCTTCTTCTTGCTCATGCTTCTGCTGTTGAACTCTACAAGACCAAGTTTCAGGCATCTCAGAAGGGTTTGATTGGCATAACCTTAGTGTCTCACTGGTTCCTGCCCTTGTCAGATAACAAAGCTGATCAAAATGCTGCTACACGAGCTGTTGATTTTATGTTTGGATGGTTTATGGATCCACTTATAAGAGGAGATTATCCAAAAAGCATGAGGACTCTGGTGGGAAACAGATTACCCAAGTTCTCTAGACAAGAATCCAAGCTTGTTAAAGGCTCATTTGATTTTGTTGGCCTTAATTACTATACCACCTATTATGCTGCTAATGCACCTAGCTTGAGCAATGCAAGACCCAATTACCAAACAGATTCTCTTGCCAATCTTACAACTGAGCGTAATGGATCACCCATTGGTCCAAGGGCTGCTTCTGATTGGTTGTATGTTTATCCGAGAGGAATTAGAGATGTGTTGCTTTACGTCAAGACAAAGTATAACAATCCTTTGATTTACATTACTGAAAATGGTATAGACGAGTATAATGATCCAACATTGACACTTGAGGGAGCTCTTGTGGATACTTTCAGAATTGATTACTATTATCGCCATCTTTATTATCTTCAATCAGCAATCAAGGATGGCGTCAATGTGAAAGGATATTTTGCATGGTCATTGCTAGATAACTTTGAATGGAATTCTGGCTACACTGTGCGTTTCGGAATCAACTTTGTGGATtataaaaacaacaacaaaagatACCAGAAACTGTCGGCTCACTGGTTCAGGAATTTTCTGCAGAAATATTAA 1470 0.4143 MGVKVVMSVLALIAISSLSLIEATQLTAPILDVSYLNLNRSSFPHGFLFGTASASYQYEGAAREGGRGPSIWDYFTHKYPEKIKDRSNGDVANDEYHHYKEDVGIMKYMNLDAYRFSISWSRILPSLTPFVTLFHWDLPQALETEYGGFLSPQIVKDYEDYVKVCFQEFGDRVKHWITLNEPWTYSNNGYATGQLAPGRCSNWLNNNCTGGDSGTEPYLVAHHLLLAHASAVELYKTKFQASQKGLIGITLVSHWFLPLSDNKADQNAATRAVDFMFGWFMDPLIRGDYPKSMRTLVGNRLPKFSRQESKLVKGSFDFVGLNYYTTYYAANAPSLSNARPNYQTDSLANLTTERNGSPIGPRAASDWLYVYPRGIRDVLLYVKTKYNNPLIYITENGIDEYNDPTLTLEGALVDTFRIDYYYRHLYYLQSAIKDGVNVKGYFAWSLLDNFEWNSGYTVRFGINFVDYKNNNKRYQKLSAHWFRNFLQKY 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1505 489 Pfam Glycosyl hydrolase family 1 127 487 IPR001360 GO:0004553|GO:0005975
Sto7g1505 489 Pfam Glycosyl hydrolase family 1 41 126 IPR001360 GO:0004553|GO:0005975
Sto7g1505 489 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 47 61 IPR033132 -
Sto7g1505 489 Gene3D Glycosidases 27 488 - -
Sto7g1505 489 SUPERFAMILY (Trans)glycosidases 33 487 IPR017853 -
Sto7g1505 489 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 7 126 - -
Sto7g1505 489 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 127 488 - -
Sto7g1505 489 PRINTS Glycosyl hydrolase family 1 signature 315 329 IPR001360 GO:0004553|GO:0005975
Sto7g1505 489 PRINTS Glycosyl hydrolase family 1 signature 391 399 IPR001360 GO:0004553|GO:0005975
Sto7g1505 489 PRINTS Glycosyl hydrolase family 1 signature 414 425 IPR001360 GO:0004553|GO:0005975
Sto7g1505 489 PRINTS Glycosyl hydrolase family 1 signature 435 452 IPR001360 GO:0004553|GO:0005975
Sto7g1505 489 PRINTS Glycosyl hydrolase family 1 signature 459 471 IPR001360 GO:0004553|GO:0005975
Sto7g1505 489 PANTHER GLYCOSYL HYDROLASE 127 488 IPR001360 GO:0004553|GO:0005975
Sto7g1505 489 PANTHER GLYCOSYL HYDROLASE 7 126 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1505 Sto-Chr7 19539833 19553400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1505 5 482 Glycoside Hydrolase AT5G42260 51.287 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1505 - K01188 gmx:100812431 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1505 7 19539833 19553400 Sto7g1505 7 19539833 19553400 ECH
Sto12g0071 12 471493 474087 Sto7g1505 7 19539833 19553400 ECH