Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0071 ATGGATATCACAAATAATGGTAGTGGTTCCTTCAACCGGAGCAGCTTCCCAGAGGGTTTTATCTTTGGAGCATCATCATCTGCTTACCaaTTTGAAGGTGCTGCAAAGGAAGGAGGCAAAGGAACAAGTATATGGGATGTTTTCACTCATAAATATCCAGAGAAGATAAAGGACAGAAGTAACGGAGACGTGGCCACGGATCAATACCACCGTTACAAGGAAGATGTGGCACTGATGAAAGAGATGAACTTGGAGTCCTATAGACTCTCCATCTCTTGGACCAGAATCTTGCCTAATGGAAAGCTTAGTGGAGGTGTGAACAGGGAAGGAATCAACTACTATAACAATCTCATCAACGAGCTTCTAGCCAACGGTATAGAGCCAATGGTGACACTTTTCCATTGGGATCTCCCGCAGAGGTTGGAAGAAGAATATGGTGGCTTTCTAAGCCCCAAAATAATAAATGATTTTGTGGATTATGCGGAGTTATGTTTCAAAGAATTTGGAGATAGAGTGAGACATTGGATAACAATAAATGAAGCATGGACTTACAGCGTATACGGTTATGCACATGGAGACCTTGCACCTGGGCGATGCTCTCCCTCTCTAAACCTCAGTTGTTTGGGTGGAGATTCTGGCACCGAGCCCTACACTGTGGCACACCACTTCTTACTCTCTCATGCTTCTGTCGTCAATCTTTACAGGACCAAGTTTCAGGCATCTCAAAAGGGAGAAATAGGGATAGCACTTGTAGCTGATTGGGCAGTCCCAGCCTCTGATTCTCTATTGGACTTTGAAGCTGCTCAAAGAGCCCATGATTTTATGATTGGAtgGTTTTTGGAACCACTGGTGAAAGGAAGATACCCAAAAAGTATGCGAGATTTGGTTGGACAGCGATTGCCAAAATTCTCACGACGCCAAAGAAAACTAGTGATTGGATCTTACGATTTCATTGGTTTAAATCACTACAGCACCACTTCAGCTGCTCATGCTCCTCAACTTGTCAATGCCCCTCGCAATTATCTCACCGATTCTCTTGTTCAACTTTCAAATCGCCCCGAAACTTATTCAACAGGAATTCGAGAACTACTACTCTATATCAACTCCAAGTACAACAATCCTACTATCTACATCACTGAAAATGGTATGAATGATTTGCATGATTCAACGGTGTCACTTGAGAAATCCCTTGCTGACACATCTAGAGTTGATTTTCTTCGTAACAATCTCTATTATCTTAACAGTGCAATTAAggaTGGTGTGAATGTGAAAGGGTATTACGCATGGTCATTTTTAGATAATTTTGAATGGAGTACGGGCCACACCGTTCGATTTGGACTGGTCTATGTGGACTACAATAATAACTTGGAACGTTATCCAAAATTCTCCGCACGATGGTTTCAGAATTTTCTCCgcacaaatattattattaaacctGCACACGACGTTGCATGA 1455 0.4165 MDITNNGSGSFNRSSFPEGFIFGASSSAYQFEGAAKEGGKGTSIWDVFTHKYPEKIKDRSNGDVATDQYHRYKEDVALMKEMNLESYRLSISWTRILPNGKLSGGVNREGINYYNNLINELLANGIEPMVTLFHWDLPQRLEEEYGGFLSPKIINDFVDYAELCFKEFGDRVRHWITINEAWTYSVYGYAHGDLAPGRCSPSLNLSCLGGDSGTEPYTVAHHFLLSHASVVNLYRTKFQASQKGEIGIALVADWAVPASDSLLDFEAAQRAHDFMIGWFLEPLVKGRYPKSMRDLVGQRLPKFSRRQRKLVIGSYDFIGLNHYSTTSAAHAPQLVNAPRNYLTDSLVQLSNRPETYSTGIRELLLYINSKYNNPTIYITENGMNDLHDSTVSLEKSLADTSRVDFLRNNLYYLNSAIKDGVNVKGYYAWSFLDNFEWSTGHTVRFGLVYVDYNNNLERYPKFSARWFQNFLRTNIIIKPAHDVA 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0071 484 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 8 476 - -
Sto12g0071 484 Pfam Glycosyl hydrolase family 1 14 474 IPR001360 GO:0004553|GO:0005975
Sto12g0071 484 SUPERFAMILY (Trans)glycosidases 10 472 IPR017853 -
Sto12g0071 484 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 20 34 IPR033132 -
Sto12g0071 484 PRINTS Glycosyl hydrolase family 1 signature 314 328 IPR001360 GO:0004553|GO:0005975
Sto12g0071 484 PRINTS Glycosyl hydrolase family 1 signature 376 384 IPR001360 GO:0004553|GO:0005975
Sto12g0071 484 PRINTS Glycosyl hydrolase family 1 signature 399 410 IPR001360 GO:0004553|GO:0005975
Sto12g0071 484 PRINTS Glycosyl hydrolase family 1 signature 420 437 IPR001360 GO:0004553|GO:0005975
Sto12g0071 484 PRINTS Glycosyl hydrolase family 1 signature 444 456 IPR001360 GO:0004553|GO:0005975
Sto12g0071 484 ProSitePatterns Glycosyl hydrolases family 1 active site. 376 384 IPR018120 -
Sto12g0071 484 Gene3D Glycosidases 2 479 - -
Sto12g0071 484 PANTHER GLYCOSYL HYDROLASE 8 476 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0071 Sto-Chr12 471493 474087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0071 1 467 Glycoside Hydrolase AT5G42260 51.143 2.26e-178 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0071 - K01188 gmx:100802250 662.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0071 12 471493 474087 Sto12g0071 12 471493 474087 ECH
Sto12g0071 12 471493 474087 Sto7g1505 7 19539833 19553400 ECH