Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1135 ATGGGTGACACATTGAAAATTTCTAACTCAAGTAAGAATCCTAAATCTAGTAATCTCATAGCTGGAAAAAAAGCATACAACAAATCGCTGGTTGCATCTCGGCCTAGAGGTTTTGGACGGAAAAATCATGAACAGCTTGTTTCGCTAATCCATGGTGGCTTTGGAAGTAGCACTGTTGGTCATATCACTTTTTTCTTAGTTAAAGTTGCTGCATTAGAAGCCGTAAGGAGGTTCACAAAAAGCAGGTGTCCAGCTGTATGGAGAGGCCTTCAGGCTCTACAAATCTTTTGCTATCCACCATTTAAATGGATTCAGAAGTGGGCACTCTTCAAAGGTTTGGTCAAAAGCATGCAGGCTCTTTCAAGACCATTACTAGTTCTTTCAATTGCGACAGCTTTCTCTGATCAAACCGAATGTAGTGATGGAACATCAGATTGTCATATGGATTCCCCTGATTCTGAACTATACTCAGAATCATCGTCTATTCAGACTAATACAAATACAAGTCATTCCGAGACAGCTCCCAGAATTTTAGAATCTGAAAACTGGTTGGTTCAACTTTATAAAGAGCTGGAAAATCAAGGGATTAGTTTGCCAGAAAGAGTCCATGAAAATGAGCTCCGGAGGTTCTATACAGCTTCTAACAATGACTTTTCAAGCTTCCTTGCCTCAATCAAGAAAACAATCCGCTGGAGGGAAACTTACAGAATTCTTTCAGCAGAAGAGCTGGAAATATGGTCAAATTTGGTTTTTTGGCATGGTTCTGATGTGATGCACAGACCTTGCCTCATTGTGAGACTTGGGGTAGCTTGTAGCACATTGTTATCTCAAGATAGACCTCGATTTGCTCAGGCCGTCATATCACAGGTAGAATATGGAGTCTTGCACTTGGTTGATGCAGACAACCCTCAAATTTCAGTATTGGTGGACTGTGAAGGGTTATCTCCATTGAGAATTCCCATGCAAATGATGAGATCTTGTTCTTCCAGTCTGCAAGATCACTTTCCAAACCTTCTTGGCTGTTTGCTTGTCATACGACTTCCAGCAGTTGTTCGTGTTATTGCCCAAACTTTCATTCAGGTTTTGAAGCCTGCTACGAGGAAGAAGTTGAAAATAGAAGGAGAGATGTATCAGAAGGTTCTTAATGACCATCTCGCCACACTGCCATCATATCTTGGAGGCTGCTGCACTTGTATGAAATGTTCTAAATTTGGCACGTGGGATATGCGGCAGCTTCGTGCAACTGGGACCAGTAGCAGGTCAGACGGGGACGAGGCCGATGGTAGTGACGACAATGAGGATTCTGAACCGCTACATCCGTCCTTCGAATTCGGTGGCCATCCACACAGTAATTATGATCACTTTCTAAGAACTGCTATCATAAGCGTTCTCATATTCTGGGTTTTCATGGCTTTTAGTGCTGGAATGTATGATCTGGGTAGTCTTCGTTTGTCTTCATGA 1461 0.423 MGDTLKISNSSKNPKSSNLIAGKKAYNKSLVASRPRGFGRKNHEQLVSLIHGGFGSSTVGHITFFLVKVAALEAVRRFTKSRCPAVWRGLQALQIFCYPPFKWIQKWALFKGLVKSMQALSRPLLVLSIATAFSDQTECSDGTSDCHMDSPDSELYSESSSIQTNTNTSHSETAPRILESENWLVQLYKELENQGISLPERVHENELRRFYTASNNDFSSFLASIKKTIRWRETYRILSAEELEIWSNLVFWHGSDVMHRPCLIVRLGVACSTLLSQDRPRFAQAVISQVEYGVLHLVDADNPQISVLVDCEGLSPLRIPMQMMRSCSSSLQDHFPNLLGCLLVIRLPAVVRVIAQTFIQVLKPATRKKLKIEGEMYQKVLNDHLATLPSYLGGCCTCMKCSKFGTWDMRQLRATGTSSRSDGDEADGSDDNEDSEPLHPSFEFGGHPHSNYDHFLRTAIISVLIFWVFMAFSAGMYDLGSLRLSS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1135 486 SUPERFAMILY CRAL/TRIO domain 247 399 IPR036865 -
Sto7g1135 486 MobiDBLite consensus disorder prediction 153 173 - -
Sto7g1135 486 MobiDBLite consensus disorder prediction 137 173 - -
Sto7g1135 486 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 252 400 IPR001251 -
Sto7g1135 486 CDD SEC14 241 394 IPR001251 -
Sto7g1135 486 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 8 481 - -
Sto7g1135 486 MobiDBLite consensus disorder prediction 415 440 - -
Sto7g1135 486 SMART sec14_4 244 397 IPR001251 -
Sto7g1135 486 Pfam CRAL/TRIO domain 249 394 IPR001251 -
Sto7g1135 486 Gene3D - 178 419 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1135 Sto-Chr7 9408380 9412826 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1135 - - gmx:100814843 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1135 7 9408380 9412826 Sto12g0183 12 1091394 1101354 CCT
Sto7g1135 7 9408380 9412826 Sto7g1135 7 9408380 9412826 ECH