Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1133 ATGAGAATTTTGATTACTGGAGGAGCTGGATTCATTGGATCACACCTAGTTGACAGATTgatggaaaatgaaaaaaatgagGTAATTGTTGCTGATAACTACTTCACTGGATCGAAGGATAACCTCAAAAAATGGATTGGTCATTCAAGATTTGAGCTTATCCGTCATGATGTTACACAGCCTTTGTTGGTTGAGGTTGATCAGATTTACCATCTTGCATGCCCTGCATCTCCTATTTTCTACAAATACAATCCTGTAAAGACAATTAAGACTAATGTGATTGGCACGATGAACCTGCTTGGACTTGCAAAGCGAGTAGGAGCAAGGATATTGCTTACATCAACTTCGGAGGTATATGGGGATCCTCTTGAGCATCCACAACCTGAAAGCTATTGGGGCAATGTTAACCCCATTGGAGTTCGAAGCTGCTATGATGAGGGGAAGCGTGTAGCTGAGACTTTGATGTTCGATTACCATAGGCAGCATGGAATAGAAATACGCGTAGCAAGAATCTTTAACACATATGGACCACGCATGAATATTGATGATGGGCGTGTTGTCAGCAACTTCATTGCTCAGGCAGTTCGTGGCGAACCTTTGACAGTCCAATCTCCAGGGACACAGACTCGTAGTTTCTGCTATGTCTCTGATTTGGTTGAAGGCCTTATCCGTCTCATGAATGGTCCACATATTGGGCCAATCAACCTTGGAAATCCAGGTGAATTTACAATGCTTGAACTTGCTGAAACAGTGAAGGAGCTTATTAATACAAACGTGGAGATAAAGATGGTGGAGAACACTCCTGATGATCCTCGACAGAGGAAGCCAGACAATTCAAAAGCGAAGGAATTGCTAGAATGGGAACCCAAGGTTACTCTGAGGGAAGGCTTGCCTCTTATGGAAGAGGATTTCCGTTTGAGGCTTGGGGTTGACAACAAGTAG 942 0.4246 MRILITGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHSRFELIRHDVTQPLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTMNLLGLAKRVGARILLTSTSEVYGDPLEHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQAVRGEPLTVQSPGTQTRSFCYVSDLVEGLIRLMNGPHIGPINLGNPGEFTMLELAETVKELINTNVEIKMVENTPDDPRQRKPDNSKAKELLEWEPKVTLREGLPLMEEDFRLRLGVDNK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1133 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 305 IPR036291 -
Sto7g1133 313 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 313 - -
Sto7g1133 313 MobiDBLite consensus disorder prediction 264 283 - -
Sto7g1133 313 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 313 IPR044516 GO:0042732|GO:0048040|GO:0070403
Sto7g1133 313 CDD UGD_SDR_e 1 305 - -
Sto7g1133 313 MobiDBLite consensus disorder prediction 265 283 - -
Sto7g1133 313 Pfam GDP-mannose 4,6 dehydratase 4 298 IPR016040 -
Sto7g1133 313 Gene3D - 123 308 - -
Sto7g1133 313 Gene3D - 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1133 Sto-Chr7 9380708 9387216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1133 1 297 Miscellaneous Gene Families AT1G02000 23.404 2.04e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1133 K08678 - gmx:100790835 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1133 7 9380708 9387216 Sto12g0187 12 1127232 1131058 CCT
Sto7g1133 7 9380708 9387216 Sto7g1133 7 9380708 9387216 ECH
Sto12g0187 12 1127232 1131058 Sto7g1133 7 9380708 9387216 ECH