Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1075 ATGGGAGCGACGAATGGAGAACGATGCCGCATATTTCCCACCATGCTGCAAGGCATAGCGCCACACTGGAAGAACCAACAATGCTACCTCTTGGACTACGAGTGTTACAAGCCGTCCGATGACCGCAAGCTCGGAACCGAGTTCTGCGGTAAGATCATTACACGTAACCCCAATTTGGGCCTCGACGACTACAAATTCGTCCTCAAGGCCATCGTGAGTTCCGGCATTGGCGAGCAAACTTACGCCCCAAGCAACTTCTTCTTGGGCCGCGAGGCCCAGCCCACTCTCTCCGACGCGATCTCCGAGATGGACGATTTCTTCCACGACTCCATCTCCAAGCTCCTCTCACGCGCCGCCGTCTCCCCCTCCGACATCGACGTCCTCGTCGTGAACGTCTCCATGTTCGCCGCCGTCCCCTCCCTCTCCTCCCGGATCATCAACCGCTACAAGATGAGGGAGGACATTAAGGTCTACAACCTCACGGGCATGGGATGCAGCGCGAGCCTGATCTCGCTCGACGTCGTCAACGGAATCTTCAGATCTCAGGCGAACAAGATCGCCCTCCTCGTGACGTCGGAGTCGCTGAGCCCGAACTGGTACTCCGGCAACGACAGATCCATGATGCTCGCGAATTGCCTCTTCCGGTCCGGCGGTTGCGCGATGCTCCTCACCAACAAACAGAGCCTGAAGCACAGATCAATGCTCAAGCTCAAATGCCTCGTGAGGACGCATCACGGCGCGAAGGACGAGGCGTTTGGTTGCTGCATCCAGAAGGAGGACGAAGAAGGGAGGCTCGGGTTCCACCTCGGGAAGACCCTCCCGAAGGCCGCCACGAGGGCATTTGTGGAAAATCTAAGAGTGATCTCCCCAAAGATCCTCCCCGTGAGGGAATTAGTACGGTTCATGGTACTAACCCTCGCGAAGAAGATAAAGATAAACACAAGCAATTACAAGGCGAGTATTAGTAGCGGGGGCGGTGGAATTACGAAATCGCCCTTGAATTTCAAAACGGGTGTGGAGCATTTTTGCCTCCACACAGGAGGGAAGGCTGTGATAGAAGGGGTAGGGAAGAGTTTGGATCTGAGTGAGTATGACCTGGAGCCAGCGAGGATGACACTTCATCGTTTCGGGAACACGTCAGCCAGTAGTTTATGGTATGTCTTGGGGTATATGGAGGCCAAGAAGAGGCTGAAGAAAGGAGAGAGGATATTGATGATAAGTTTTGGTGCTGGGTTTAAGTGTAATAGTTGCTTGTGGGAGGTAATGAGGGATATTGAGGGTAAGAATGTGTGGGAAGATTGCATTCATGAGTATCCACCACAATGCTTAGCCAATCCTTTCTTGGAGAAGTATGGTTGGCTCCACAAAGTGGAGGATCTAACTAACTTCCAATTGCCGGATTATCTCCACTAA 1413 0.5322 MGATNGERCRIFPTMLQGIAPHWKNQQCYLLDYECYKPSDDRKLGTEFCGKIITRNPNLGLDDYKFVLKAIVSSGIGEQTYAPSNFFLGREAQPTLSDAISEMDDFFHDSISKLLSRAAVSPSDIDVLVVNVSMFAAVPSLSSRIINRYKMREDIKVYNLTGMGCSASLISLDVVNGIFRSQANKIALLVTSESLSPNWYSGNDRSMMLANCLFRSGGCAMLLTNKQSLKHRSMLKLKCLVRTHHGAKDEAFGCCIQKEDEEGRLGFHLGKTLPKAATRAFVENLRVISPKILPVRELVRFMVLTLAKKIKINTSNYKASISSGGGGITKSPLNFKTGVEHFCLHTGGKAVIEGVGKSLDLSEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLKKGERILMISFGAGFKCNSCLWEVMRDIEGKNVWEDCIHEYPPQCLANPFLEKYGWLHKVEDLTNFQLPDYLH 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1075 470 PANTHER 3-KETOACYL-COA SYNTHASE 23 460 IPR012392 GO:0006633|GO:0016020|GO:0016747
Sto7g1075 470 SUPERFAMILY Thiolase-like 240 422 IPR016039 GO:0016746
Sto7g1075 470 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 339 420 IPR013747 -
Sto7g1075 470 PANTHER 3-KETOACYL-COA SYNTHASE 23 460 - -
Sto7g1075 470 CDD CHS_like 27 419 - -
Sto7g1075 470 PIRSF Very_long_ch_3-ktacl-CoA_syn 10 453 IPR012392 GO:0006633|GO:0016020|GO:0016747
Sto7g1075 470 Gene3D - 72 421 IPR016039 GO:0016746
Sto7g1075 470 SUPERFAMILY Thiolase-like 23 229 IPR016039 GO:0016746
Sto7g1075 470 Pfam FAE1/Type III polyketide synthase-like protein 24 309 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1075 Sto-Chr7 8773934 8781160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1075 24 467 Acyl Lipid Metabolism Gene Families AT2G28630 68.304 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1075 K15397 - gmx:100790992 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1075 7 8773934 8781160 Sto12g0225 12 1338152 1339570 CCT
Sto7g1075 7 8773934 8781160 Sto7g1075 7 8773934 8781160 ECH
Sto12g0225 12 1338152 1339570 Sto7g1075 7 8773934 8781160 ECH