Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0225 ATGGACTCCCTCACTCTACTCTACATCCTTCTGGCAtcctacttcttcttcttcctctggaAATTCTTCCAACACAAAAAAGACCAAGAATGCTACATCCTCGATTACCAGTGCTACAAGCCCACCGATGATCGCATGCTCGGCACCGAGTTCTGCGGCCGAGTCATCAAACGCACCCAGAATTTGGGTCTGAGCGAGTACAAGTTCCTCCTCAAGGCCATCGTCAGCTCCGGCATCGGCGAGCAAACCTACGCCCCACGCAACGTCTTCTCCGGCCGCGAAGCCTCCCCCACTCTCGCCGACGGCGTCTCCGAGATGGAGGAGTTCTTCCTCGACTCCATCTCCAAGCTCCTCGCCAGGTCAGCAATCCACCCCTCCCAGATCGACATCCTCGTCGTCAACATCTCCATGTTCGCCTCCCTCCCCTCTCTGTCTTCCCGAATCATTCACATGTACAAACTCAGGGAGGACATTAAGGTTTACAATCTCACCGGCATGGGGTGTAGCGCTAGCCTCATCTCGCTCGACATCGTTAGCAACATTTTCAAGACGCAAAAGAACAAGCTCGCGCTATTGGTCACTTCCGAGTCTCTCAGCCCTAATTGGTACTCCGGAAACGACAAATCCATGGTTCTAGCCAATTGTTTGTTCCGCTCTGGAGGGTGTGCTATTTTGTTGACCAACAAGAGGTCCATGAGGCACAAGGTGATGTTGAAATTGAAGTGCTTGGTTCGGACCCATCACGGGGCGAGAGACGAGTCCTTCAATTGTTGCATTCAGAAGGAAGACGAGCAAGGACATCTTGGGTTTCACCTCGGGAAGAATCTCCCAAAGGCGGCTACTAGAGCGTTTGTGGACAATTTAAGGGTAATCTCGCCCAAGATCTTACCGATGAGGGAGTTAGTGAGGTTCATGGTGGTTTCACTGGTGAAGAAGCTCAACATTATGAGTGGGAATTCGACCAAGTCGTCAGGTGGAGTAATGACGAAATCGCCATTGAATTTCAAAACAGGGGTGGATCATTTCTGCCTCCACACGGGAGGGAAGGCGGTGATAGATGGGATCGGAATGAGCTTGGATCTGAGTGAGTATGATCTCGAGCCAGCGAGGATGACACTACACCGTTTTGGGAACACTTCCGCGAGTAGCTTGTGGTATGTGTTGGGGTACATGGAGGCGAAGAAGAGGCTCAAGAAGGGAGATACGGTGTTGATGATAAGCTTCGGTGCGGGATTTAAATGTAATAGTTGCTTGTGGGAAGTAGTGAGGGACGTGGGAGATAGGAATGTGTGGGAGGATTGCATTGATCACTATCCCCCACACTCTTTGGCCAATCCCTTCATGGAGAAGTATAGTTGGATCAATAATCTTCAGGTCGAGGATCTACCCAATGTTCAAATTCCTGATTTTCTCAAGTAA 1419 0.4968 MDSLTLLYILLASYFFFFLWKFFQHKKDQECYILDYQCYKPTDDRMLGTEFCGRVIKRTQNLGLSEYKFLLKAIVSSGIGEQTYAPRNVFSGREASPTLADGVSEMEEFFLDSISKLLARSAIHPSQIDILVVNISMFASLPSLSSRIIHMYKLREDIKVYNLTGMGCSASLISLDIVSNIFKTQKNKLALLVTSESLSPNWYSGNDKSMVLANCLFRSGGCAILLTNKRSMRHKVMLKLKCLVRTHHGARDESFNCCIQKEDEQGHLGFHLGKNLPKAATRAFVDNLRVISPKILPMRELVRFMVVSLVKKLNIMSGNSTKSSGGVMTKSPLNFKTGVDHFCLHTGGKAVIDGIGMSLDLSEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLKKGDTVLMISFGAGFKCNSCLWEVVRDVGDRNVWEDCIDHYPPHSLANPFMEKYSWINNLQVEDLPNVQIPDFLK 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0225 472 PANTHER 3-KETOACYL-COA SYNTHASE 1 460 IPR012392 GO:0006633|GO:0016020|GO:0016747
Sto12g0225 472 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Sto12g0225 472 Gene3D - 66 422 IPR016039 GO:0016746
Sto12g0225 472 CDD CHS_like 31 419 - -
Sto12g0225 472 SUPERFAMILY Thiolase-like 27 422 IPR016039 GO:0016746
Sto12g0225 472 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 453 IPR012392 GO:0006633|GO:0016020|GO:0016747
Sto12g0225 472 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 339 420 IPR013747 -
Sto12g0225 472 PANTHER 3-KETOACYL-COA SYNTHASE 1 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0225 Sto-Chr12 1338152 1339570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0225 19 469 Acyl Lipid Metabolism Gene Families AT2G28630 70.961 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0225 K15397 - gmx:100809149 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1075 7 8773934 8781160 Sto12g0225 12 1338152 1339570 CCT
Sto12g0225 12 1338152 1339570 Sto12g0225 12 1338152 1339570 ECH
Sto12g0225 12 1338152 1339570 Sto7g1075 7 8773934 8781160 ECH