Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0951 ATGCTAAGTCGACGACGCGTCGTTTTCGTTTCACTCACTACTCTTCTCCTCATCTCATTCTTCTCTCTCCCTTCATCATGCAAGGCCGTACaaaacgacgacgacgacgacgacgacgaagaTCTCAGTTTTCTCGAAGAAGCCGATGGTGACAGCTCCACTTCACACGATCACTACCCAGATCCCGCCCAttccgacgacgacgacgacgaagcCGAatacgacgacgacgacgatttCGGGGACTTCTCCGGCAACGGCGAGTCGGAGGACGATGGAGAGGCGTACAAACAACCGGTGGTGGATGATAAAGACGTCGTCGTTTTGAAGGAGCGCAATTTCAGTGACGTTGTGGAGGATAACCAGTTTGTGATGGTGGAATTCTATGCTCCGTGGTGTGGTCACTGCCAAGCCTTGGCGCCGGAGTACGCTGCCGCCGCGACGGAATTGAGGTCGGAGAATGTGGTTTTGGCGAAGGTGGATGCCACGGAGGAGAATGAATTGGCACATGAGTACGACGTTCAGGGATTCCCTACCGTCTACTTTTTTATCGATGGGGTTCATAAGCCTTATACTGGTCAGAGGACCAAAGATGCCATAGTGACCTGGATAAGGAAGAAGATAGGGCCTGGTATTTACAACATAACAACATTGGATGACGCTGAAAGCAAATTGACATCTGAAAACAAAATTGTTCTGGGCTTCCTCAGCTCTTTAGTGGGTCCTGAGAGTGAGGAGCTAGCTGCTGCTTCAAGACTTGAGGATGATGTCAATTTTTATCAAACAGTGAATCCTGATGTGGCAAAGCTTTTTCATATTGACCCAAATGTTAAACGCCCTGCTTTGGTCCTGCTcaagaaagaggaagagaaatTGAACTATTTtgATGGCGAATTTGTAAAATCTAAAATAGCAGACTTTGTATCCTTGAACAAAATTCCTTTGGTTACAACTTTTACGAGAGAAAATGCCCCATCAATTTTTGAAAGTTCGATTAAGAAACAGCTGTTGCTGTTCACAACTTTAAATGATTCAGAGAAGGTCATCCCAGTATTTCAAGAAGCAGCAAAGCTTTTCAAGGGAAAGCTGATATTTGTACATGTGGAAATGGATAATGAAGATGTTGGAAAACCTGTTGCAGATTATTTTGGTATCACTGGAAATGCTCCCCAAGTAATTGCATACTCAGCAAACGATGATGGAAAGAAATTTTTGCTTGATGGAGAGGTGACCACTGACAATATTAAGGCATTTGGGGACAATTTCCTTGAAGACAAGTTAAAACCTTCTTATAAGTCAGATCCAGTTCCTGAAACTAATGATGGTGATGTGAAAATAGTTGTTGGGGATAATTTTGATGAAATTGTCTTGGATGAGTCGAAGGACGTTCTCCTTGAGATTTATGCACCTTGGTGTGGCCATTGCCAAGCATTGGAACCAACATACAACAAGCTTGCAAAACAACTGCGTAGCATTGAGTCTCTTGTGATAGCCAAGATGGATGGAACAACAAATGAGCACCCCAGGGCAAAGGCTGATGGATTCCCTACTATTCTGTTCTTCCCAGCAGGGAACAAGACCTCTGAACCTATTTCTGTTGATGCAGATCGAACAGTGGTGGCCTTGTACAAGTTCCTCAGGAAACATGCATCAATCCCATTCAAGCTTGAGAAACCAACCTCAACTCCGAAGCCCGACCCCAAGGAGAATCAGAAAGATGAATTGTGA 1728 0.4196 MLSRRRVVFVSLTTLLLISFFSLPSSCKAVQNDDDDDDDEDLSFLEEADGDSSTSHDHYPDPAHSDDDDDEAEYDDDDDFGDFSGNGESEDDGEAYKQPVVDDKDVVVLKERNFSDVVEDNQFVMVEFYAPWCGHCQALAPEYAAAATELRSENVVLAKVDATEENELAHEYDVQGFPTVYFFIDGVHKPYTGQRTKDAIVTWIRKKIGPGIYNITTLDDAESKLTSENKIVLGFLSSLVGPESEELAAASRLEDDVNFYQTVNPDVAKLFHIDPNVKRPALVLLKKEEEKLNYFDGEFVKSKIADFVSLNKIPLVTTFTRENAPSIFESSIKKQLLLFTTLNDSEKVIPVFQEAAKLFKGKLIFVHVEMDNEDVGKPVADYFGITGNAPQVIAYSANDDGKKFLLDGEVTTDNIKAFGDNFLEDKLKPSYKSDPVPETNDGDVKIVVGDNFDEIVLDESKDVLLEIYAPWCGHCQALEPTYNKLAKQLRSIESLVIAKMDGTTNEHPRAKADGFPTILFFPAGNKTSEPISVDADRTVVALYKFLRKHASIPFKLEKPTSTPKPDPKENQKDEL 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0951 575 MobiDBLite consensus disorder prediction 50 65 - -
Sto7g0951 575 MobiDBLite consensus disorder prediction 556 575 - -
Sto7g0951 575 PANTHER PROTEIN DISULFIDE-ISOMERASE 3 566 - -
Sto7g0951 575 SUPERFAMILY Thioredoxin-like 440 551 IPR036249 -
Sto7g0951 575 SUPERFAMILY Thioredoxin-like 311 441 IPR036249 -
Sto7g0951 575 TIGRFAM pdi_dom: protein disulfide-isomerase domain 110 207 IPR005788 GO:0003756
Sto7g0951 575 CDD PDI_b'_family 323 423 - -
Sto7g0951 575 Gene3D Glutaredoxin 95 208 - -
Sto7g0951 575 MobiDBLite consensus disorder prediction 29 98 - -
Sto7g0951 575 MobiDBLite consensus disorder prediction 561 575 - -
Sto7g0951 575 Pfam Thioredoxin-like domain 247 418 - -
Sto7g0951 575 SUPERFAMILY Thioredoxin-like 213 323 IPR036249 -
Sto7g0951 575 TIGRFAM ER_PDI_fam: protein disulfide isomerase 104 575 IPR005792 GO:0003756
Sto7g0951 575 CDD PDI_a_PDI_a'_C 444 546 - -
Sto7g0951 575 Gene3D Glutaredoxin 209 312 - -
Sto7g0951 575 ProSiteProfiles Thioredoxin domain profile. 422 551 IPR013766 -
Sto7g0951 575 PANTHER PROTEIN DISULFIDE ISOMERASE 3 566 - -
Sto7g0951 575 SUPERFAMILY Thioredoxin-like 99 209 IPR036249 -
Sto7g0951 575 CDD PDI_b_family 212 311 - -
Sto7g0951 575 CDD PDI_a_family 109 204 - -
Sto7g0951 575 ProSiteProfiles Thioredoxin domain profile. 74 209 IPR013766 -
Sto7g0951 575 MobiDBLite consensus disorder prediction 66 89 - -
Sto7g0951 575 PRINTS Thioredoxin family signature 124 132 - -
Sto7g0951 575 PRINTS Thioredoxin family signature 132 141 - -
Sto7g0951 575 PRINTS Thioredoxin family signature 173 184 - -
Sto7g0951 575 ProSitePatterns Thioredoxin family active site. 464 482 IPR017937 -
Sto7g0951 575 MobiDBLite consensus disorder prediction 32 47 - -
Sto7g0951 575 Gene3D Glutaredoxin 313 437 - -
Sto7g0951 575 Gene3D Glutaredoxin 438 552 - -
Sto7g0951 575 ProSitePatterns Thioredoxin family active site. 125 143 IPR017937 -
Sto7g0951 575 Pfam Thioredoxin 106 206 IPR013766 -
Sto7g0951 575 Pfam Thioredoxin 444 545 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0951 Sto-Chr7 7491301 7496392 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0951 K09580 - rcu:8264073 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0951 7 7491301 7496392 Sto12g0291 12 1755813 1759371 CCT
Sto7g0951 7 7491301 7496392 Sto7g0951 7 7491301 7496392 ECH
Sto12g0291 12 1755813 1759371 Sto7g0951 7 7491301 7496392 ECH