Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0291 ATGCTACGTCGACGACACGTCGTTGTGTTTTCGCTCGCtgctcttctcctcctcctctcctccttctctttcaCGTTATGCAAGGCCGCCGAAAACGATAACGACGATGAAGATCTCAGCTTTCTCGAAGAAGCTGATGACAGCACCACTTCCCACGAGGACGACCATTATCCGGATCCGGACCATTTCGATGATGATCTCGAGGATTTCTCTGGCTTCGACGAATCAGATATCGATGCGGAGGCTTACAAAGAGCCCGAGGTGGATGATAAAGACGTTGTTGTATTGAAGGAGGGTAATTTCAGCCATGTTGTGAAGACAAATCAGTTTGTCATGGTGGAATTCTACGCGCCCTGGTGTGGCCACTGTCAGGCTTTGGCGCCAGAGTATGCCGCAGCCGCCACCGAGTTGAAGGGTGAGAATGTGATTTTGGCGAAGGTGGATGCCACGGAGGAGAATGAATTGGCCCAGGAGTACGAAATTCAGGGGTTCCCCACTATCTACTTCTTTGTCGATGGGGTTCACAAACCTTTCAATGGCCAGAGGACCAAAGATGCTATAGTAACCTGGATTAAGAAGAAGATAGGACCCGGTGTAAACAACATAACTACATTGGATGATGCTGAACGCATATTGACCTCTGAAAGCAAAGTTGTTTTGGGCTTCCTTGACAATTTAGTGGGTCCTGAGAGTGAGGAGCTAGCTGCTGCATCACGACTTGAGGATGATGTCAGTTTTTATCAAACCGTAAATCCTGATGTGGCAAAGCTTTTCCATATTGACCCACATGTCAAACGCCCTGCTTTGATCCTGCTCAAGAAAGAGGAGGAGAAATTGAACTATTTTGATGGCCAATTCGTAAAATCTGCAATATCAGATTTTGTATTCTCCAACAAACTTCCTTTGGTTACAACCTTTACAAGAGAAAGTGCCCAATCAGTTTTTGAAAATCCAATCAAGAAACAGCTGTTGCTGTTTGTGACTTCAAATGATTCAGAGAAGTTACTCCCAATATTTCAAGAAGCAGCGAAGTTTTTCAAAGGAAAGCTGATCTTTGTACACGTGGAATTGGATAATGAAGATGTTGGAAAGCCTGTTTCAGATTACTTCGGAATCAGTGGGAATGATCCAAagGTACTTGCCTACACTGGAAATGATGATGGAAAGAAATTTGTGCTTGATGGAGAGGTGACTATTGAGAAGATTAAGGCATTTGGGGATGATTTCCTTGAAGACAAGCTAAAACCTTTCTACAAGTCTGATCCCGTTCCTGAAAATAATGATGGTGATGTGAAAATAGTTGTTGGGGATAACTTTGATGAGATTGTCTTGGACGAGTCTAAGGATGTACTACTTGAGATCTATGCACCTTGGTGTGGTCATTGCCAAGCTTTGGAACCAACATACAATAAGCTTGCAAAACATCTCCGTGGCATTGAGTCTGTTGTCATAGCCAAGATGGATGGAACAACAAATGAGCATCCCAGGGCCAAGAGTGATGGATACCCTACTATTCTCTTCTTCCCAGCAGGAAATAAGAGTTTTGACCCTATTACTGTTGATACAGATCGTACAGTGGTAGCCTTCTATAAGTTCCTAAAGAAGCATGCATCAATCCCATTCAAGCTTCAGAAACCAACCTCAACTCCCAATCCCACTAGTGCTGATGCAAAGGAGAGTCAGACTGAGAGTAGCAGTAGCGATGTGAAGGATGAATTATGA 1722 0.4297 MLRRRHVVVFSLAALLLLLSSFSFTLCKAAENDNDDEDLSFLEEADDSTTSHEDDHYPDPDHFDDDLEDFSGFDESDIDAEAYKEPEVDDKDVVVLKEGNFSHVVKTNQFVMVEFYAPWCGHCQALAPEYAAAATELKGENVILAKVDATEENELAQEYEIQGFPTIYFFVDGVHKPFNGQRTKDAIVTWIKKKIGPGVNNITTLDDAERILTSESKVVLGFLDNLVGPESEELAAASRLEDDVSFYQTVNPDVAKLFHIDPHVKRPALILLKKEEEKLNYFDGQFVKSAISDFVFSNKLPLVTTFTRESAQSVFENPIKKQLLLFVTSNDSEKLLPIFQEAAKFFKGKLIFVHVELDNEDVGKPVSDYFGISGNDPKVLAYTGNDDGKKFVLDGEVTIEKIKAFGDDFLEDKLKPFYKSDPVPENNDGDVKIVVGDNFDEIVLDESKDVLLEIYAPWCGHCQALEPTYNKLAKHLRGIESVVIAKMDGTTNEHPRAKSDGYPTILFFPAGNKSFDPITVDTDRTVVAFYKFLKKHASIPFKLQKPTSTPNPTSADAKESQTESSSSDVKDEL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0291 573 Gene3D Glutaredoxin 425 539 - -
Sto12g0291 573 TIGRFAM ER_PDI_fam: protein disulfide isomerase 91 573 IPR005792 GO:0003756
Sto12g0291 573 MobiDBLite consensus disorder prediction 543 562 - -
Sto12g0291 573 ProSiteProfiles Thioredoxin domain profile. 74 196 IPR013766 -
Sto12g0291 573 Gene3D Glutaredoxin 81 195 - -
Sto12g0291 573 SUPERFAMILY Thioredoxin-like 298 428 IPR036249 -
Sto12g0291 573 ProSiteProfiles Thioredoxin domain profile. 409 538 IPR013766 -
Sto12g0291 573 MobiDBLite consensus disorder prediction 543 573 - -
Sto12g0291 573 CDD PDI_a_PDI_a'_C 431 533 - -
Sto12g0291 573 CDD PDI_a_family 94 191 - -
Sto12g0291 573 PANTHER PROTEIN DISULFIDE ISOMERASE 3 556 - -
Sto12g0291 573 TIGRFAM pdi_dom: protein disulfide-isomerase domain 97 194 IPR005788 GO:0003756
Sto12g0291 573 ProSitePatterns Thioredoxin family active site. 451 469 IPR017937 -
Sto12g0291 573 SUPERFAMILY Thioredoxin-like 426 538 IPR036249 -
Sto12g0291 573 SUPERFAMILY Thioredoxin-like 202 310 IPR036249 -
Sto12g0291 573 PANTHER PROTEIN DISULFIDE-ISOMERASE 3 556 - -
Sto12g0291 573 CDD PDI_b_family 199 298 - -
Sto12g0291 573 CDD PDI_b'_family 320 410 - -
Sto12g0291 573 Gene3D Glutaredoxin 300 424 - -
Sto12g0291 573 SUPERFAMILY Thioredoxin-like 86 196 IPR036249 -
Sto12g0291 573 Gene3D Glutaredoxin 196 299 - -
Sto12g0291 573 Pfam Thioredoxin-like domain 234 406 - -
Sto12g0291 573 Pfam Thioredoxin 431 516 IPR013766 -
Sto12g0291 573 Pfam Thioredoxin 93 193 IPR013766 -
Sto12g0291 573 ProSitePatterns Thioredoxin family active site. 112 130 IPR017937 -
Sto12g0291 573 PRINTS Thioredoxin family signature 111 119 - -
Sto12g0291 573 PRINTS Thioredoxin family signature 119 128 - -
Sto12g0291 573 PRINTS Thioredoxin family signature 160 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0291 Sto-Chr12 1755813 1759371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0291 K09580 - rcu:8264073 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0951 7 7491301 7496392 Sto12g0291 12 1755813 1759371 CCT
Sto12g0291 12 1755813 1759371 Sto12g0291 12 1755813 1759371 ECH
Sto12g0291 12 1755813 1759371 Sto7g0951 7 7491301 7496392 ECH