Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0886 ATGGCTCCTCTCTTTTGTGTTCTTATTGTATTCTCAGTCATCATGATTTCTTCTAGCATTGCTCAGCATCATCCACCCTCACCTGGATACTTCCCAAGTTCAAGAATTAGTCCTCTGAGATTTAGTAAAGGGTTTAGAAATCTATGGGGAACTCAGCATCAGAGACTAGAACAAGGCTCATTAACAATCTGGCTTGACTCCACCTCagGGAGTGGATTCAAGTCACTGCATTCTTATCGATCTGGATACTTTGGTGCTGCAATTAAGCTTCAACCTGGTTATACTGCAGGAGTCATCACATCTCTATATCTTTCAAACAACCAAGACCACCCAGGAAACCATGATGAAATAGACATTGAGTTTCTGGGTACTACACCAGATAAGCCTTATGTGTTGCAGACTAATGTATACATCAGAGGAAGTGGAGATCACAGGAATGTTATAGGAAGAGAGATGAAGTTCCATCTTTGGTTCGACCCAACACAGGATTTTCACCACTATGCTATTCTTTGGAAACCCAGTGAGATCATATTTCTAGTGGATGATGTGCCCATAAGGAGGTACCCTAGGAAGAGTGAGGCCACATACCCTACAAGACCAATGTATGTGTATGGATCAATATGGGATGCATCTTCATGGGCCACAGAGGATGGAAAATACAGAGCAGATTATAGGTACCAGCCCTTCATTGGTAGGTACAGAAAGTTCAAAGTACAAGGTTGTACCATTGAAGGCCCTGCCACGTGTCAACCACCCTCTTCTTCACCATCTGGGTATGGGAGTCTGAGCCCTCAGCAACACAAGGCAATGCAATGGGTCCAAAACAACTTCATGGTTTATAACTACTGCCATGACCCCAGAAGAGACCATACCCTCATTCCTGAGTGTTAG 891 0.4355 MAPLFCVLIVFSVIMISSSIAQHHPPSPGYFPSSRISPLRFSKGFRNLWGTQHQRLEQGSLTIWLDSTSGSGFKSLHSYRSGYFGAAIKLQPGYTAGVITSLYLSNNQDHPGNHDEIDIEFLGTTPDKPYVLQTNVYIRGSGDHRNVIGREMKFHLWFDPTQDFHHYAILWKPSEIIFLVDDVPIRRYPRKSEATYPTRPMYVYGSIWDASSWATEDGKYRADYRYQPFIGRYRKFKVQGCTIEGPATCQPPSSSPSGYGSLSPQQHKAMQWVQNNFMVYNYCHDPRRDHTLIPEC 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0886 296 Pfam Glycosyl hydrolases family 16 42 225 IPR000757 GO:0004553|GO:0005975
Sto7g0886 296 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 5 296 IPR044791 GO:0004553
Sto7g0886 296 PIRSF EndGlu_transf 2 296 IPR016455 GO:0010411|GO:0016762|GO:0042546
Sto7g0886 296 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 31 5 296 - -
Sto7g0886 296 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 20 233 IPR000757 GO:0004553|GO:0005975
Sto7g0886 296 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 259 296 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Sto7g0886 296 Gene3D - 21 296 - -
Sto7g0886 296 SUPERFAMILY Concanavalin A-like lectins/glucanases 41 296 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0886 Sto-Chr7 6779805 6781241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0886 5 296 Glycoside Hydrolase AT3G44990 65.753 5.81e-144 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0886 K08235 - gmx:100776165 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0886 7 6779805 6781241 Sto12g0346 12 2159954 2161321 CCT