Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0850 ATGGCGGCCACTACTTTTTCATCTACGATTCTCTTCGCCGTTGCGCTGCTGtcggtggcggcggcggcggcggaagCTTGGGGGTTTCCGGCGTCGCTGACTCTGGAAAGAGCATTTAAGACGAATCATGGAGTGGAGCTGAGTAGGTTAAGAGCTCGGGATAGCCTCAGGCATCGGAGATTGTTGCAGTCTTCCCACGGTGTGGTTGATTTTCCAGTTGCAGGCACTTTCGATCCCTTCGAAGTCGGGCTTTACTATACGAAAGTCCAGTTAGGTTCTCCTCCAAGGGAATTCCACGTGCAGATTGACACTGGCAGTGATGTACTTTGGGTTAGTTGTGGCTCCTGCAATGGTTGTCCTCAGACAAGTGGACTCCAAATTCAGCTCAATTATTTTGACCCCGGGAGTTCGTCAACATCTTCGCTGATCTCTTGTTCGGACCAAAGATGCAAATCCGGAATGCAATCATCAGATGCCGGATGTTCCAGTCAGAGCAATCAGTGCGGTTACACATTCCAGTATGGAGATGGCAGCGGGACATCGGGTTATTATGTGTCTGATTTGCTTCATTTTGATGCTATATTTGAGGGATCCGTGAGTTCAAATTCTTCAGCTTCTGTAGTTTTTGGTTGTAGCAACCAGCAGACTGGGGACTTGACAAAGTCTGACAGAGCAGTGGATGGGATATTTGGGTTTGGGCAACAGGGCATGTCTGTCATCTCCCAGCTTTCATCTCAAGGCATAGCGCCAAGAGTGTTCTCCCACTGTCTCGATAGTGGTGGTGGGGGTATATTGGTTCTTGGTGAGATTGTGGAGCCAAATATAGTTTATACTCCACTTGTTCCATCACAGCCCCATTACAATTTAAATCTCCAGAGCATCTCTGTCAACGGCCAAATATTACCAAttgattcatcagttttcgcaacaTCAAGCAGCCGAGGTACCATTATTGATTCTGGAACAACTTTGGCATACCTTGCAGAAGAGGCTTATGATCCCTTTGTCAGTGCGGTTACTTCTTCAGTTCCACAAACCATCCGAACTGTTCTTTCCCGGGGAAACCAGTGCTACTTAATAGTCACCTCCAGAATCTCTGATTATTTTCCTCTAGTAAGTCTGAACTTTGCTGGTGGCGCATCTATGGTTTTAAGACCAGAGGACTACCTCATACAGCAGAATTCAATTGGTGGTGCATCAGTGTGGTGTATTGGCTTTCAGAAAATCCAGGGTCAAGGGATAACAATTTTAGGAGACCTTGTATTGAAAGACAAAATTTTTGTTTATGATCTGGCTGGTCAACGCATTGGATGGGCTGACTATGACTGTTCTTTGTCGGTTAATGTGTCTGCATCAACTGGCACTGGCAGGAGTGAATTTGTGAATGCAGGAGAGCTAAGTGGCAGCACTGGTTTACGTGAAGGGATAAAGGCAGGAATCTTGGCTTACTTTATTATGCACATAACACTCTTCAGCTGCTTCGTGCTTTTGTAG 1494 0.4465 MAATTFSSTILFAVALLSVAAAAAEAWGFPASLTLERAFKTNHGVELSRLRARDSLRHRRLLQSSHGVVDFPVAGTFDPFEVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCGSCNGCPQTSGLQIQLNYFDPGSSSTSSLISCSDQRCKSGMQSSDAGCSSQSNQCGYTFQYGDGSGTSGYYVSDLLHFDAIFEGSVSSNSSASVVFGCSNQQTGDLTKSDRAVDGIFGFGQQGMSVISQLSSQGIAPRVFSHCLDSGGGGILVLGEIVEPNIVYTPLVPSQPHYNLNLQSISVNGQILPIDSSVFATSSSRGTIIDSGTTLAYLAEEAYDPFVSAVTSSVPQTIRTVLSRGNQCYLIVTSRISDYFPLVSLNFAGGASMVLRPEDYLIQQNSIGGASVWCIGFQKIQGQGITILGDLVLKDKIFVYDLAGQRIGWADYDCSLSVNVSASTGTGRSEFVNAGELSGSTGLREGIKAGILAYFIMHITLFSCFVLL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0850 497 CDD pepsin_A_like_plant 85 443 IPR034161 -
Sto7g0850 497 Gene3D Acid Proteases 270 450 IPR021109 -
Sto7g0850 497 Gene3D Acid Proteases 62 269 IPR021109 -
Sto7g0850 497 PANTHER ASPARTYL PROTEASES 17 460 IPR001461 GO:0004190|GO:0006508
Sto7g0850 497 SUPERFAMILY Acid proteases 80 446 IPR021109 -
Sto7g0850 497 Pfam Xylanase inhibitor N-terminal 85 268 IPR032861 -
Sto7g0850 497 PRINTS Pepsin (A1) aspartic protease family signature 91 111 IPR001461 GO:0004190|GO:0006508
Sto7g0850 497 PRINTS Pepsin (A1) aspartic protease family signature 316 327 IPR001461 GO:0004190|GO:0006508
Sto7g0850 497 PRINTS Pepsin (A1) aspartic protease family signature 415 430 IPR001461 GO:0004190|GO:0006508
Sto7g0850 497 Pfam Xylanase inhibitor C-terminal 286 439 IPR032799 -
Sto7g0850 497 ProSiteProfiles Peptidase family A1 domain profile. 85 439 IPR033121 -
Sto7g0850 497 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 17 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0850 Sto-Chr7 6451714 6456057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0850 59 444 Miscellaneous Gene Families AT1G44130 27.047 4.15e-42 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0850 - K00924 gmx:100791299 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0850 7 6451714 6456057 Sto12g0368 12 2318246 2328161 CCT
Sto7g0850 7 6451714 6456057 Sto7g0850 7 6451714 6456057 ECH