Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0741 ATGGGCATCTTCAGCCAAGATCCGAATTCGAAACCGGTGGTGATCCGTCAAGTATGGGCCTCCAATCTCGATTCCGAATTCGACCTCATCCGGGATCTGATTGATGCCTACCCTTTCATCTCCATGGACACGGAATTTCCCGGCGTCATCTACCGTCCGCCGCAGGCCGCCCCGTGCCGCCACCGCCAGATCCGCCCCTCCGATCACTACCGCTTCCTCAAGTCCAACGTCGACGCCTTGAACATCATCCAACTCGGTCTCACCCTCACCGACGCCGACGGCAACCTCCCCCACCTCGGATCTGGTAACCGATTCATCTGGGAGTTCAATTTCAGGGATTTCGACGTGGAGCGTGACGCCTACGCGCCCGACTCCATCGCGCTGCTCCGGCAACAGGGGATCGACTTCCGGCGGAACGCCGACGACGGGGTGGACTCGCTCCGGTTCGCCGAGCTGATGATGTCGTCGGGACTCGTGTGTAACGACTCGGTGAGCTGGGTGACGTTTCACAGCGCGTACGATTTCGGATATTTGGTGAAGATCCTGACCCGACGGAGCCTCCCGGACGGGCTGGAGCAATTCTTGGGGACGTTGAGGGTGTTTTTTGGAAATAACGTTTACGACTTGAAGCACATGATGCGGTTCTGTAAGAGCTTGTACGGCGGGTTGGACCGGGTGGCGCGTGCCCTTAACGTGGACCGGGCGGTTGGAAAATGCCACCAAGCCGGGTCAGAcagcttgctgacgtggcatgcatTTCAGAAAATGAGGGATATGTATTTCGTAAAGGATGGCCCGCAAAAGCATGCGGGAGTGCTGTATGGGTTAGAGCCAGTGTTCACTTGCTTGCCTCTACCTGAACCTCTACTCCATCCAACACCTGCGACTTTGAAGTTATTGCAAGATTGA 909 0.5545 MGIFSQDPNSKPVVIRQVWASNLDSEFDLIRDLIDAYPFISMDTEFPGVIYRPPQAAPCRHRQIRPSDHYRFLKSNVDALNIIQLGLTLTDADGNLPHLGSGNRFIWEFNFRDFDVERDAYAPDSIALLRQQGIDFRRNADDGVDSLRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTRRSLPDGLEQFLGTLRVFFGNNVYDLKHMMRFCKSLYGGLDRVARALNVDRAVGKCHQAGSDSLLTWHAFQKMRDMYFVKDGPQKHAGVLYGLEPVFTCLPLPEPLLHPTPATLKLLQD 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0741 302 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED 10 278 - -
Sto7g0741 302 Pfam CAF1 family ribonuclease 18 145 IPR006941 -
Sto7g0741 302 Gene3D - 3 279 IPR036397 GO:0003676
Sto7g0741 302 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10 278 IPR039637 GO:0004535|GO:0030014
Sto7g0741 302 SUPERFAMILY Ribonuclease H-like 9 276 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0741 Sto-Chr7 5495315 5496618 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0741 K12581 - gmx:100817875 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0741 7 5495315 5496618 Sto12g0447 12 2854541 2855383 CCT
Sto7g0741 7 5495315 5496618 Sto7g0741 7 5495315 5496618 ECH