Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0740 ATGCAAGTCTCCCTCTACGCCAAAAACCCTAACCGCCGCATTGGAATCTTCTACCACACCCTCGCCGTCCACGTGGCATACCGTGGCCAGCAGATCTCCCTCCCCACCGCCCTCCCTCCCACCTACCAACCCCACGACGACTTCACCGTCTGGTCGCCCTACCTCCACGGCTCCGCCGTGGCGTGGAAGGTGGGCACGTGGATGTCCGGGAAGTACCATATGTATGTGAGCTGTCCGGCGTATTATAAGTTCGCCGGAGATGATCAGAACGGTAGTACGGCCGGAGGAATTGTGGGGCCGGCGGCGAAGCTTCAGGTTCTGCAAAATTGCGTAGTTGatgtttaa 345 0.5826 MQVSLYAKNPNRRIGIFYHTLAVHVAYRGQQISLPTALPPTYQPHDDFTVWSPYLHGSAVAWKVGTWMSGKYHMYVSCPAYYKFAGDDQNGSTAGGIVGPAAKLQVLQNCVVDV 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0740 114 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 1 60 - -
Sto7g0740 114 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 60 114 - -
Sto7g0740 114 Pfam Late embryogenesis abundant protein 7 50 IPR004864 -
Sto7g0740 114 PANTHER OS05G0367900 PROTEIN 60 114 IPR044839 GO:0098542
Sto7g0740 114 PANTHER OS05G0367900 PROTEIN 1 60 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0740 Sto-Chr7 5485224 5485654 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0740 - - pvu:PHAVU_005G120900g 134.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0740 7 5485224 5485654 Sto12g0450 12 2875384 2876040 CCT
Sto7g0740 7 5485224 5485654 Sto7g0740 7 5485224 5485654 ECH