Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0450 ATGTCGGTGAAGGAATGCGGCCACCACGACGACGACGATGACCGGCAGGTGGTCCGCCGTGTAGTGTCCGGCATCGTGGGCTTCATCGTCCTAATCCTCCTCATCATCTTCCTAATATGGATCATCCTGAGGCCCTCCAAACCCCGCTTCATCCTCCAAGACGCCACCGTCTTCGCCTTCAACCTCTCCTCCCCCGTGGCCCCCACCTTAACCCCCAACACCATCAGCATCACCATGCAAGTCACGCTCTCCGCCCACAACCCCAACGACCGCATCGGAATCTACTACCACAAGCTCGACGTCTACGCCTCCTACCGCAACCAGCAGATCTCTTTGGGCACCCTCCTTCCGGCGAGTTACCAGGGCCACAAGGACGTGACGGTGTGGTCGCCCTTCCTCTACGGGACGGCGGTGCCGGTGTCGCCCTACGTGTTGGATTCGCTGCGGCAGGATCAGAATGCGGGAGGCGTGCTGGTCAACGTCAAGGTCAACGGGCGCGTGAAGTGGAAGGTCGGCTCTTGGGTCTCCGGAAGGTACCATCTCTTCGTCAATTGTCCCGCCTATATCAGGTTCGCCGGAGACGCTGCTAATGGCATCGGAGTTGTGGGTCCCGCCGTCAAGTTTCAGATTCTACAAAGTTGCAGTGTTGATGtttga 657 0.5875 MSVKECGHHDDDDDRQVVRRVVSGIVGFIVLILLIIFLIWIILRPSKPRFILQDATVFAFNLSSPVAPTLTPNTISITMQVTLSAHNPNDRIGIYYHKLDVYASYRNQQISLGTLLPASYQGHKDVTVWSPFLYGTAVPVSPYVLDSLRQDQNAGGVLVNVKVNGRVKWKVGSWVSGRYHLFVNCPAYIRFAGDAANGIGVVGPAVKFQILQSCSVDV 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0450 218 Pfam Late embryogenesis abundant protein 82 185 IPR004864 -
Sto12g0450 218 PANTHER OS05G0367900 PROTEIN 10 218 IPR044839 GO:0098542
Sto12g0450 218 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 10 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0450 Sto-Chr12 2875384 2876040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0450 14 185 EF-hand Containing Proteins AT5G21130 24.862 8.08e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0450 - - pvu:PHAVU_005G120900g 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0740 7 5485224 5485654 Sto12g0450 12 2875384 2876040 CCT
Sto12g0450 12 2875384 2876040 Sto12g0450 12 2875384 2876040 ECH