Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0706 ATGGATTGTCGCATCTATGGCGTCACCAAGCTCCGCATCTTCTGCaccttccttctccttcttctctccGGCTTCCCCCTCGCATTGTCGGAAACACCCAATCTCAGGTCCTCCTCGGTCAGCTCCGGTCAGATTAACTCCAACTCCGTTCTCGTGGCTCTTCTCGACTCGCATTACACGGAGCTCGCCGAGTTAGTGGAGAAGGCTATGCTGTTGCAGACTCTGGAAGATACTGTCGGTAGCCACAATATCACCATCTTCGCCCCCAAAAACGAAGCCCTCGAACGCGATCTCGACCCCGAGTTCAAGCGCTTCCTTCTAGAGCCCGGTAATCTCAACATTCCGACCCGAATCGGATCGGAACAGTCGCCGATTCGCGCCGGGTCGACCCGTCACAGGACGCTTGCGAACGACTACCTCCACCTCGAAAGCAATGGGACTTTAGAATGGACGGTGGATCGCGCCAGGATTATCCACCCAGACGTGGTGACCCGACCCGATGGCGTCATCCACGGGATTGAGCGCCTCCTGATCCCTCGCACCGTACAAGACGACTTCAACCGCCGGCGAAGTCTTCAGTCTATCACGGCGGTGAAGCCGGAGGGAGCACCGGAGGTGGACCCGAGGACGCATCGGCTCAAGAAACCGGCTCCACCGGCAAAACCGGGTTCTCCGCCGGCGCTGCCAATCTACGATGCAATGGCTCCGGGACCCGCACTAGCTCCGGCTCCGGCGCCGGGACCAGGCGGCGCACACCGCCACTTCAACGGTGAAgcgaaagtgaaggatttcatTCAGACACTGCTACATTACGGTGGGTACAATGAGATGGCTGATATATTGGTGAATCTAACTTCCTTAGCCACCGAAATGGGTCGGTTAGTCTCCGAAGGGTACGTGCTCACCGTTTTGGCTCCAAATGATGAAGCCATGGCTAAATTGACCACGGACCAATTGAGTGAACCGGGCGCACCGGAACAAATAATGTATTACCATCTCATACCAGAGTATCAAACCGAAGAGAGTATGTACAATGCGGTTCGACGGTTTGGGAAGGTCCGGTACGATACCCTGCGGTTACCACATAAGGTAGTGGCTcaggaggcagatgggtcagtGAAGTTCGGGCAGGGAGACGGGTCGGCCTATTTGTTCGACCCGGATATATATACAGATGGGCGGATCTCAGTGCAGGGAATCGATGGGGTTTTGTTCCCAttggaagaggaggaggaatcGAAGCCCATTACTAGAACGGTTCAACCCGCTAAGGTCGTGGTCAAGCACAGAAGAGGAAAATTGCTGGAGACAGCATGTTGGGTGCTTGGAACCTTCGGACAAGATGGTAAATTCACCACTTGCCATTGA 1368 0.5212 MDCRIYGVTKLRIFCTFLLLLLSGFPLALSETPNLRSSSVSSGQINSNSVLVALLDSHYTELAELVEKAMLLQTLEDTVGSHNITIFAPKNEALERDLDPEFKRFLLEPGNLNIPTRIGSEQSPIRAGSTRHRTLANDYLHLESNGTLEWTVDRARIIHPDVVTRPDGVIHGIERLLIPRTVQDDFNRRRSLQSITAVKPEGAPEVDPRTHRLKKPAPPAKPGSPPALPIYDAMAPGPALAPAPAPGPGGAHRHFNGEAKVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPLEEEEESKPITRTVQPAKVVVKHRRGKLLETACWVLGTFGQDGKFTTCH 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0706 455 ProSiteProfiles FAS1/BIgH3 domain profile. 261 389 IPR000782 -
Sto7g0706 455 Pfam Fasciclin domain 58 179 IPR000782 -
Sto7g0706 455 Pfam Fasciclin domain 286 406 IPR000782 -
Sto7g0706 455 SUPERFAMILY FAS1 domain 51 179 IPR036378 -
Sto7g0706 455 MobiDBLite consensus disorder prediction 218 232 - -
Sto7g0706 455 MobiDBLite consensus disorder prediction 198 250 - -
Sto7g0706 455 Gene3D FAS1 domain 253 406 IPR036378 -
Sto7g0706 455 SUPERFAMILY FAS1 domain 240 407 IPR036378 -
Sto7g0706 455 Gene3D FAS1 domain 48 180 IPR036378 -
Sto7g0706 455 ProSiteProfiles FAS1/BIgH3 domain profile. 46 177 IPR000782 -
Sto7g0706 455 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 1 454 - -
Sto7g0706 455 SMART fasc_3 302 407 IPR000782 -
Sto7g0706 455 SMART fasc_3 85 180 IPR000782 -
Sto7g0706 455 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 1 454 IPR044654 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0706 Sto-Chr7 5189500 5191950 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0706 - - qsu:112040765 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0706 7 5189500 5191950 Sto12g0478 12 3140930 3142957 CCT