Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0678 ATGGCGGCGTCGTCTAGCTCCTCTACCTCTCAGCCTCTGCTATCATCACACTCAGATCATCATGAGCTTGAAGCAATACTATCCGACACCACACTCTCCTTCTTCCACCGTCTACGTCTCGCCTCCTTCATCGAACTCAACCTCCTCTTCCGCCTCGCCGCTCCCGCCGTCTTCGTCTACATGATCAACTACGCCATGTCCGTCTCCACTCGCATCTTCTCCGGCCACCTCGGCAATTCTCAGCTCGCCGCCGCTTCCCTCGGCAACAGCGGCATCCAAGTCTTCGCCTATGGTCTCATGTTGGGAATGGGAAGCGCCGTGGAGACTCTGTGCGGGCAAGGATTCGGTGCGAAGAAGTACGAAATGCTAGGGATTTACATGCAGCGAGCAACCGTCGTTTTGAGTCTAGTTGGTGTCGTTTTATCCGTCGTGTACGTTTTCTCCGAACCTATTTTGATCTGGTTAGGCGAGTCCCCAAACATTGCTTCTGATGCTGCAATTTTTGTGCGTGGCCTAATACCTCAGATTTTCGCCTACGCTATAAACTTCCCCATTCAGAAATTCTTACAGTCACAAAGTGTGGTGGCTCCTAGTGCCTATATATCCACAGCCACGCTTGTGGTGCACCTTTTGTTGAATTGGATTGTTGTGTACAGATTTGGGCTGGGCCTATTGGGGGCCTCCTTGGTGTTGAGCTTGTCTTGGTGGATCATTGTGATTGCACAGTTTGTGTACATAGTGAAGAGTGATAGGTTTAGGCAGACTTGGGGTGGGTTTTCGGTTCGGGCCTTCTCGGGGTTGCCGGAGTTCTTCAGGTTGTCGGCGGCGTCGGCGGTGATGCTCTGCCTGGAGACTTGGTATTTCCAGATTCTGGTTCTCTTGGTTGGGTTGCTTGATAATCCTGAGTTGGCTCTGGATTCACTCTCTATATGCACAATGATATCTGGATGGGTATTCATGATCTCAGTTGGATTCAATGCTGCTATAAGTGTGAGAGTGGGGAACGAAGTAGGAGCAGGACATCCAAAATCTGCTGCATTTTCTGTGATTGTAGTGACATCAATCTGTTTCACTATATCAGTGATTATAGCAATACTTGTACTTGCACTTCGGCATGTTGTGAGCTATGCCTTCACAGAGGGTGAAGTTGTAGCTGCTGCTGTTTCAGATCTTTGCCCACTATTAGCCATTACTCTTATTCTTAATGGAATTCAGCCTGTTCTTTCtgGAGTGGCTGTTGGGTGTGGATGGCAAGCATTGGTTGCATATATAAACGTAGGTTGTTACTACGTAGTTGGTATACCTTTGGGCTTTCTTCTTGGCTTTTACTTCAATATGGGAGCTAAGGGAATATGGTTGGGGATGATAGGTGGCACATTGATGCAGACTCTCATTTTGATTTATGTCACTTTCCGTACGGATTGGGATAAGGAGGTAACAGAGGCAAAGAAAAGGCTGAGTAAGTGGAATCACCAAGATGAAAACTGCAATTTTTAA 1497 0.4776 MAASSSSSTSQPLLSSHSDHHELEAILSDTTLSFFHRLRLASFIELNLLFRLAAPAVFVYMINYAMSVSTRIFSGHLGNSQLAAASLGNSGIQVFAYGLMLGMGSAVETLCGQGFGAKKYEMLGIYMQRATVVLSLVGVVLSVVYVFSEPILIWLGESPNIASDAAIFVRGLIPQIFAYAINFPIQKFLQSQSVVAPSAYISTATLVVHLLLNWIVVYRFGLGLLGASLVLSLSWWIIVIAQFVYIVKSDRFRQTWGGFSVRAFSGLPEFFRLSAASAVMLCLETWYFQILVLLVGLLDNPELALDSLSICTMISGWVFMISVGFNAAISVRVGNEVGAGHPKSAAFSVIVVTSICFTISVIIAILVLALRHVVSYAFTEGEVVAAAVSDLCPLLAITLILNGIQPVLSGVAVGCGWQALVAYINVGCYYVVGIPLGFLLGFYFNMGAKGIWLGMIGGTLMQTLILIYVTFRTDWDKEVTEAKKRLSKWNHQDENCNF 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0678 498 Pfam MatE 277 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto7g0678 498 Pfam MatE 55 215 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto7g0678 498 PANTHER MULTIDRUG RESISTANCE PROTEIN 18 486 - -
Sto7g0678 498 TIGRFAM matE: MATE efflux family protein 55 452 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto7g0678 498 CDD MATE_eukaryotic 45 481 IPR045069 GO:0042910|GO:1990961
Sto7g0678 498 PANTHER PROTEIN DETOXIFICATION 40 18 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0678 Sto-Chr7 4955535 4960953 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0678 K03327 - cit:102610535 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0678 7 4955535 4960953 Sto12g0507 12 3317545 3320660 CCT
Sto7g0678 7 4955535 4960953 Sto7g0678 7 4955535 4960953 ECH