Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0507 aTGGCTTCGCTCCAAAACGACGACGTTCATCAAGCGTTGCTGCCCCAGAGCGAGCCCTCCTTCACTCGCTCATCCTCCTCCAAGTACGAAGAATCATCCAATGGGGAACTGGAGAGGATACTATCCGATACGGACCTCCCCTTGCTACGCCGACTCACCGCCGCCACGTGGGTGGAGATGAAGCTCTTGTTCTTCCTGGCCGCTCCCGCCGTCATCGTCTATTTGATCAACTACATCATGTCCATGTCCACCCAGATCTTCTCCGGCCACCTCGGCAACCTGGAGCTCGCCGCCGCCTCCCTCGGCAACACCGGCATCCAAGTCTTCGCCTACGGTCTCATGTTGGGAATGGGAAGCGCGGTAGAGACACTATGTGGGCAAGCGTTTGGAGCTCACAAGTACGAAATGCTAGGCGTCTACTTGCAGAGATCAACCATCCTTCTTACGCTAGCTGGCATTCTTCTAACCATCATTTACATATTCTCCAAACCCATTCTGATCTTCCTGGGAGAATCTCCAAGAATAGCATCCGCAGCCGCGCTCTTTGTGTACGGCCTAATCCCTCAGATCTTCGCCTACGCTGTGAACTTCCCAATCCAGAAGTTTCTTCAGGCTCAGAGCATAGTGGCCCCCAGTGCCTACATATCATCCGCCACGCTGCTGCTTCACCTTCTGCTGAGCTGGGTGTTTGTGTACAAAATAAATCTGGGGTTATTGGGTGCTTCCTTCGTTCTCAGCTTCTCCTGGTGGATCATTGTGATTGCTCAGTTTGTGTACATTGTCAAGAGTGAGAAATGCAAGAAGACGTGGCAGGGTTTCTCGGTGCAGGCCTTTTCTGCCTTGCCTGACTTTTTCAAGCTCTCCGCTGCTTCTGCGGTCATGCTCTGCTTGGAGACTTGGTATTTTCAGATCCTTGTTCTGCTTGCTGGCTTGCTCGATCACCCTGAGTTGGCTCTCGATTCCCTTTCTATTTGCACCACAGTCTCTGGATGGGTCTTCATGATCTCAGTTGGATTCAACGCAGCCGCCAGTGTAAGAGTGAGCAACGAGCTCGGAGCAAGAAATCCAAAATCAGCTGCGTTTTCAGTGGTGGTGGTCACATCCATATCTTTCATCATATCGGTAATAGCAGCAATAATTGTGCTTGCTTTAAGGGATGTCATTAGCTATGCATTCACCGAAGGTGAAGTAGTGGCCGCTGCTGTCTCTGATCTTTGTCCTCTCTTAGCACTCGCTATCGTCCTCAATGGCATTCAACCCGTCTTATCTGGAGTGGCTGTTGGGTGTGGATGGCAGACTTTTGTTGCATATGTAAACGTAGGCTGTTATTATGGAGTAGGCATTCCATTGGGTTCGTTTCTAGGCTTCTACTTCAAACTTGGTGCTAagGGAATATGGTTGGGGATGCTAGGTGGAATGTTGATGCAAACAATCATTTTGATGTGGGTCACGTTTCGAACAAATTGGAACACAGAGgTTGAAGAAGCAGCTAAGAGGTTGAACAAGTGGGAAGACAAGAAGGAGGCTCCACTTCTAAAGGATTGA 1545 0.499 MASLQNDDVHQALLPQSEPSFTRSSSSKYEESSNGELERILSDTDLPLLRRLTAATWVEMKLLFFLAAPAVIVYLINYIMSMSTQIFSGHLGNLELAAASLGNTGIQVFAYGLMLGMGSAVETLCGQAFGAHKYEMLGVYLQRSTILLTLAGILLTIIYIFSKPILIFLGESPRIASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVAPSAYISSATLLLHLLLSWVFVYKINLGLLGASFVLSFSWWIIVIAQFVYIVKSEKCKKTWQGFSVQAFSALPDFFKLSAASAVMLCLETWYFQILVLLAGLLDHPELALDSLSICTTVSGWVFMISVGFNAAASVRVSNELGARNPKSAAFSVVVVTSISFIISVIAAIIVLALRDVISYAFTEGEVVAAAVSDLCPLLALAIVLNGIQPVLSGVAVGCGWQTFVAYVNVGCYYGVGIPLGSFLGFYFKLGAKGIWLGMLGGMLMQTIILMWVTFRTNWNTEVEEAAKRLNKWEDKKEAPLLKD 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0507 514 PANTHER PROTEIN DETOXIFICATION 14 500 - -
Sto12g0507 514 Pfam MatE 69 229 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto12g0507 514 Pfam MatE 291 451 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto12g0507 514 PANTHER MULTIDRUG RESISTANCE PROTEIN 14 500 - -
Sto12g0507 514 TIGRFAM matE: MATE efflux family protein 69 466 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto12g0507 514 CDD MATE_eukaryotic 59 495 IPR045069 GO:0042910|GO:1990961
Sto12g0507 514 Coils Coil 486 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0507 Sto-Chr12 3317545 3320660 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0507 K03327 - gmx:100801718 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0678 7 4955535 4960953 Sto12g0507 12 3317545 3320660 CCT
Sto12g0507 12 3317545 3320660 Sto12g0507 12 3317545 3320660 ECH