Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0600 ATGGCGGCCGTTACTTCTTTGTCTTTCTCAGCATTAACTCAATGTTCTGAAAGAAAACTGTCCGTGTCTTCCACTCGTTTTCTGGGATCCAATTCCAACGCCTTTCGCTTGCGGATGAATTTTTCGTATCATGGTGTAATTCTTCCATTTCCCAATTCCGCCCCTAAAATGGTTATTCAATGCATGTCCTCTCAGACCCAGACAGATGAATCGAAATCCTTTTCTAATGGTCAATACTCAACATTACTGCCAATTAGGCAAGACATTGCCACTGTTTCTGAGACAAAATTCAATTTCCTCAAGGCATATAAGCGACCAATCCCTAGTATCTACAACACTGTGCTACAGGAGCTCCTTGTCCAGCAACATTTGATGAGATACAAGAGATCATACCGCTATGACCCTGTATTTGCTCTTGGTTTTGTCACTGTATATGATCAGCTTATGGAAGGATATCCTAGTGACGAGGATCGAGATGCCATCTTCAAGGCATACATTGAGGCATTGAAAGAAGATCCAAACCAATATAGAGTAGATGCACAGAAGTTGGAAGAGTGGGCTCGGGCTCAAAATCCAACTTCCCTGGTTGAGTTTTCATCCCGAGAAGGAGAAGTAGAGGGATTATTGAAGGATATTGCAGAAAGAGCTGGGGGGAAGGGGAATTTCAGTTATAGTCGCTTTTTTGCCGTAGGCCTCTTTCGTCTCCTTGAGTTGGTAAATGCAACAGAACCAACAATTTTGGAAAAGCTTTGTGCGGCTTTGAACATTGACAAAAAAAGTGTTGATCGGGATTTGGATGTGTATCGTAATCTGCTTTCCAAGTTGGTACAAGCAAAAGAGCTACTGAAGGAATATGTTGACAGggagaagaagaaaagggaaGAAAGGACGGAATCCCAAAAGGCTAACGAGGCAATAACAAAATGCTTGGGACTACATTAA 942 0.414 MAAVTSLSFSALTQCSERKLSVSSTRFLGSNSNAFRLRMNFSYHGVILPFPNSAPKMVIQCMSSQTQTDESKSFSNGQYSTLLPIRQDIATVSETKFNFLKAYKRPIPSIYNTVLQELLVQQHLMRYKRSYRYDPVFALGFVTVYDQLMEGYPSDEDRDAIFKAYIEALKEDPNQYRVDAQKLEEWARAQNPTSLVEFSSREGEVEGLLKDIAERAGGKGNFSYSRFFAVGLFRLLELVNATEPTILEKLCAALNIDKKSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERTESQKANEAITKCLGLH 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0600 313 Hamap Protein Thf1 [thf1]. 86 294 IPR017499 GO:0010207|GO:0015979
Sto7g0600 313 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 88 293 IPR017499 GO:0010207|GO:0015979
Sto7g0600 313 Pfam Thylakoid formation protein 91 296 IPR017499 GO:0010207|GO:0015979
Sto7g0600 313 Coils Coil 268 298 - -
Sto7g0600 313 PANTHER PHOTOSYSTEM II BIOGENESIS PROTEIN 87 307 - -
Sto7g0600 313 PANTHER PHOTOSYSTEM II BIOGENESIS PROTEIN 1 68 - -
Sto7g0600 313 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 68 IPR017499 GO:0010207|GO:0015979
Sto7g0600 313 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 87 307 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0600 Sto-Chr7 4424413 4427526 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0600 - - gmx:100814341 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0600 7 4424413 4427526 Sto12g0590 12 3767064 3770679 CCT
Sto7g0600 7 4424413 4427526 Sto7g0600 7 4424413 4427526 ECH