Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0577 ATGGATCAACCAGATCAGGAAAAGGACCTGAAAGCAAAGGAAGCGGAACTTAAAGCTAGAGAGGCTGATCTTATAAGGAGGGAACAGGAACTAAAACGAAAAGAAGATGCTATAGCACGCTCTGGAGTAACGCTAGAGATAAAAAACTGGCCCTCTTTTTTCCCTATCATTCATCATGACGTGGCTAATGATATACCATTACATCTTCAGAAGCTCCAATACGTTGCATTCTCAACATTTTTGGGTATTGTTTTGTGCCTTACGTGGAATATCGCGGCAGTTTCTGTAGCTTCTCTCAAAGGGGAAGGTCTTATCGTCTGGTTTCTTGCTATTATCTACTTTCTCTGTGGCGTTCCAGGAGCCTATGTAATGTGGTATCGCCCTCTTTATCGTGCAATGAGGACTGACAGTGCTCTGAGATTTGGCTGGTGCACATCGTTTTTTGCGTTTGCGCTACAATTGCTCCTCCATTTATCTTCAAAGGATATTCTCTCACGAATTCTACCTGCGTTAAGTTTGATAGACGGCCGTCAAATTCTTGCGATTTTATACTTTGTTGGGTTTGGACTTTTCTGCATTGAGACACTGCTAAGCATCTATGTTattcagCAAGTATTAATGTACTTCCGTGGAAGTGGGAAGGCTGCAGAGGCTAAGCGTGACGCTAGAAACACTGTCATGGCAGCTCTATGA 693 0.4271 MDQPDQEKDLKAKEAELKAREADLIRREQELKRKEDAIARSGVTLEIKNWPSFFPIIHHDVANDIPLHLQKLQYVAFSTFLGIVLCLTWNIAAVSVASLKGEGLIVWFLAIIYFLCGVPGAYVMWYRPLYRAMRTDSALRFGWCTSFFAFALQLLLHLSSKDILSRILPALSLIDGRQILAILYFVGFGLFCIETLLSIYVIQQVLMYFRGSGKAAEAKRDARNTVMAAL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0577 230 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 5 230 IPR007273 GO:0015031|GO:0016021
Sto7g0577 230 Pfam SCAMP family 48 211 IPR007273 GO:0015031|GO:0016021
Sto7g0577 230 Coils Coil 10 34 - -
Sto7g0577 230 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 5 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0577 Sto-Chr7 4306212 4309101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0577 1 230 Miscellaneous Gene Families AT2G20840 61.506 7.48e-98 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0577 K19995 - pop:18108591 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0577 7 4306212 4309101 Sto12g0608 12 3847375 3852775 CCT