Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0608 ATGAATCGCTACGATTCCAATCCTTTCGAAGAAGAAGAGGTCAATCCCTTTGCGGATGGATCAAAAGGAAAAGGGCAATCAAATTATGGTGGAGGTGCATTTTATACCACTAACCCTGGAAGTGTTCCGTCTGCAACATCTAAACTCTCACCCCTTCCTCCTGAGCCTTATGATCGTGGGGCAACTATTGATATTCCTCTCAATTCCTCACAGGACACCAAAGCCAAGGAGAAGGAGCTTCAAGCTAAGGAGGCTGAATTGAGAAAGAGGGAACAGgaactaaaacGAAGGGAAGATGCTATAGCACGAGCCGGTATAGTTATAGAGGAGAAAAATTGGCCTCCTTTTTTCCCAATCATTCATCATGATATTGGAAAGGAAATACCAATACATCTTCAGAAGGTTCAGTATATTGCATTCACAACTTTTTTGGGCTTGGTTCTGTGCCTTGCATGGAACATTGTGGCGGTTACTACTGCTTGGATTAAAGGGGAAGGTCCAACAATCTGGTTTCTTGCTATTATCTACTTTATTTCAGGTGTTCCGGGAGCCTATGTGTTGTGGTATCGCCCTCTTTACCGTGCTATGAGGACTGACAGTGCTCTGAAGTTTGGCTGGTTTTTCCTCGTTTACCTGTTGCACATTGCCTTTTGCATTTTTGCTTCAGTTGCTCCTCCAATTATCTTCAAAGGAAAATCGCTCACAGGTATTTTGCCTGCGATAGATTTGTTGGGTGACCAAGCATTAGTTGGGATATTCTACTTCATTGGGTTTGGGTTCTTCTGCCTTGAGTCTCTGCTGAGCGTCTGGGTTATCCAGCAAGTATATATGTACTTCCGTGGCAGTGGCAAGGCTGTTGAGATGAAGCGTGAAGCTGCAAGAAGCACCATGATGGCTGCTCTATGA 906 0.4393 MNRYDSNPFEEEEVNPFADGSKGKGQSNYGGGAFYTTNPGSVPSATSKLSPLPPEPYDRGATIDIPLNSSQDTKAKEKELQAKEAELRKREQELKRREDAIARAGIVIEEKNWPPFFPIIHHDIGKEIPIHLQKVQYIAFTTFLGLVLCLAWNIVAVTTAWIKGEGPTIWFLAIIYFISGVPGAYVLWYRPLYRAMRTDSALKFGWFFLVYLLHIAFCIFASVAPPIIFKGKSLTGILPAIDLLGDQALVGIFYFIGFGFFCLESLLSVWVIQQVYMYFRGSGKAVEMKREAARSTMMAAL 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0608 301 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 1 301 - -
Sto12g0608 301 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 301 IPR007273 GO:0015031|GO:0016021
Sto12g0608 301 MobiDBLite consensus disorder prediction 30 48 - -
Sto12g0608 301 Pfam SCAMP family 110 281 IPR007273 GO:0015031|GO:0016021
Sto12g0608 301 Coils Coil 70 100 - -
Sto12g0608 301 MobiDBLite consensus disorder prediction 1 18 - -
Sto12g0608 301 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0608 Sto-Chr12 3847375 3852775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0608 3 301 Miscellaneous Gene Families AT1G11180 67.427 1.19e-145 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0608 K19995 - mnt:21404990 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0577 7 4306212 4309101 Sto12g0608 12 3847375 3852775 CCT
Sto12g0608 12 3847375 3852775 Sto12g0608 12 3847375 3852775 ECH