Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0418 ATGTGGAGAGATAGTGGAACTCCTGCTGATTCTTTCTACGAAGTCCGACCCGAGTGTGCCGACGATGCTGGTAAAACACTAAGTACAAGAAAATGGCATGCTTCATTCGACGCAGAAGGACGTCTGGATATAGGCAGGACCCTACGAAGAATCCAACGAGGGGGAATTCATCCATCAATTAGGGGAGAAGTTTGGGAATTTTTACTTGGCTGCTATGATCCAAGGAGTACATTCGATGAAAGAGATCAGATAAGACAGCGCCGAAGGATGCAATATGCTAAATGGAAGGAAGAATGCCGCCAATCGTTTCCCTTTGTTGGAAGTGGTAGATTTATTACAGCACCTATAATCACTGAAGATGGTCAGCCGATACAAGATCCATTGGTGCTGTTAGAAACAAATCCAGACAAGGGAGTGATTGTACCCATTCAAGATTGCCTAAATGCTTCAAGTACAGGCATTGCAAATAATTTAGAGAGGGTAACAGACAAGAGAGTAATTCAGTGGATGTTAACTCTTCATCAAATAGGTCTTGACGTGGTTCGCACTGATAGGACACTGGTTTTTTATGAGAAGCAAGAGAACTTGTCAAAACTATGGGATGTTCTTGCAGTCTATGCTTGGATAGATAAAGACGTGGGTTATTGTCAAGGAATGAGTGATCTCTGCTCCCCTATGGTAATTCTTCTTAATGATGAAGCTGATTCATTTTGGTGCTTTGAGCGTCTGATGCGCAGATTGCGAGGAAATTTCAGATGCACCGATAACTCAGTTGGGGTGGAAGCTCAACTAAGTAATTTGGCTTCAGTTACCCAAGTCATTGATCCAAAACTTCATCATCATATAGAGACTCTTGGTGGAGGTGACTATCTGTTCGCTTTTCGGATGCTGATGGTTTTGTTTCGTCGTGAATTCTCGTTTTGTGATTCACTGTACCTTTGGGAGATGATGTGGGCTCTAGAATACGATCCTGACTTGTTCTTGATGTATGAAGAGTCTGAATCAGCATCTGAAAAAGCTGAGGGATCTAGAGGAAGAACAAAGTCAATACGTCAATGTGGGAAGTATGAGAGAGAAAATCTGAAAAATGCTGCAAAGACTGCTAATGCTCCTCTTCCCATATCTGTTTTTCTTGTTGCCAGTGTGTTGAAAGATAAGAGCTCAAAACTGCTGCACGAAGCGCGTGGCCTCGATGATATTGTCAAGATACTGAATGATATGACTGGAAATTTAGACGCCAGAAAAGCTTGCACTGGGGCAATGAAACTTCACAAAAAATATTTGAGAAAGGCCAATGCCATGCAAGCGTCTCATCTTGAGGACCACCATCACATAAATTCTGTCCTTGATCTGATCAAACAATCTGAAGAAAGCATGCCTGATGCCCCTGTTGAAGAAAATGGCACCACAAACTCCCCAAAAGGCAGTGGCAAATCCAACTCCCATACCAAGGGAACCATAACCAGAGTGTTCTGTATCACAGGGAAGACTGAGGCTAGTGAGTCTACCAGTGATGTTGCTACACTCAACTCCAGCCCATTCACAACAATCTTGGTGATGATGAGACCAGGAAGAAAGGATGGATGA 1587 0.4304 MWRDSGTPADSFYEVRPECADDAGKTLSTRKWHASFDAEGRLDIGRTLRRIQRGGIHPSIRGEVWEFLLGCYDPRSTFDERDQIRQRRRMQYAKWKEECRQSFPFVGSGRFITAPIITEDGQPIQDPLVLLETNPDKGVIVPIQDCLNASSTGIANNLERVTDKRVIQWMLTLHQIGLDVVRTDRTLVFYEKQENLSKLWDVLAVYAWIDKDVGYCQGMSDLCSPMVILLNDEADSFWCFERLMRRLRGNFRCTDNSVGVEAQLSNLASVTQVIDPKLHHHIETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFLMYEESESASEKAEGSRGRTKSIRQCGKYERENLKNAAKTANAPLPISVFLVASVLKDKSSKLLHEARGLDDIVKILNDMTGNLDARKACTGAMKLHKKYLRKANAMQASHLEDHHHINSVLDLIKQSEESMPDAPVEENGTTNSPKGSGKSNSHTKGTITRVFCITGKTEASESTSDVATLNSSPFTTILVMMRPGRKDG 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0418 528 ProSiteProfiles TBC/rab GAP domain profile. 55 321 IPR000195 -
Sto7g0418 528 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 1 432 - -
Sto7g0418 528 SMART tbc_4 52 344 IPR000195 -
Sto7g0418 528 Gene3D - 257 444 - -
Sto7g0418 528 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 259 427 IPR035969 -
Sto7g0418 528 MobiDBLite consensus disorder prediction 464 483 - -
Sto7g0418 528 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 33 281 IPR035969 -
Sto7g0418 528 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 152 251 - -
Sto7g0418 528 MobiDBLite consensus disorder prediction 457 483 - -
Sto7g0418 528 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 1 432 - -
Sto7g0418 528 Pfam Rab-GTPase-TBC domain 167 319 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0418 Sto-Chr7 3053391 3063121 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0418 - - aprc:113854580 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0418 7 3053391 3063121 Sto4g0008 4 69553 82923 CCT
Sto7g0418 7 3053391 3063121 Sto7g0418 7 3053391 3063121 ECH