Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0008 TTGTTCAAGGGGTCCGGGTCAGGGTGCGGGCAAGAATATCGATCTCAACAGGCATTGCTGTGGTTCCTCCTGTTTTTCTTATTGACAACATTTTGGTGCTTTGGGATGTGGAGAGACAGTGGAGCTCCTGCTGATTCTTACTATGAAATCCGGCCCGAGTGTACCGATGTCCCCAAGACTCGATTTAAAATTAAGGCTGGTAAAACACTAAGTGTAAGAAAATGGCAGGCTGCATTTACTCCAGAAGGGTATCTGGACATAGGCAAAACTCTGAGCCGAATCCAACGGGGGGGAATCCATCCGACAATTAGAGGAGAAGTTTGGGAATTTCTACTAGGTTGCTATGACCCAAATAGTTCATCAGAGGAAAGAGAACAGATACGACAGCGCCGAAGGGTGCAATATAATACGTGGAAGGAATTATGCCACCAATTGTTTCCACTTGTTGGAAGTGGTAGATTTATTACAGCACCTGTAATCACTGAAGATGGTCAGCCAATTCTTGATCCACTAGTGCTGTTAGAAACAAATCCAGAAAAGGGTGCAGTTATACCTCCTCCAGATAATATTGGGGGTGGTGTAAGTACagatgctgcaaataatttagaaAAGGTGACGGACAAGAGAATAATTCAGTGGATGTTAACTCTCCATCAAATAGGTCTTGATGTGCTTCGCACTGATAGGACATTGGTTTTTTATGAGAAGCAAGAGAATTTGTCAAAACTATGGGATATTCTTGCTGTTTATGCTTGGATAGATACAGATGTCGGCTATTGTCAAGGAATGAGTGACCTATGCTCCCCTATGATAATACTTCTGGATGATGAAGCTGATGCCTTTTGGTGTTTTGAACGTCTGATGCGCAGATTGCGAGGAAATTTCAGATGCACTGATAGCTCTGTTGGTGTGGAGGCACAGCTGAGTAATTTGGCAGCAATTACCCAAGTCATTGATCCAAAACTTCATCAACATTTGGAGCATCTTGGTGGAGGCGACTATCTGTTCGCTTTTCGAATGCTTATGGTTTTGTTTCGTAGAGAATTCTCTTTTTGTGATTCCCTGTACCTTTGGGAGATGATGTGGGCTCTAGAATACGATCCTGACTTGTTCATGATGTATGAAGACGATTCAGATTCTGAAAGGTCTGAGGAATCTAAACGAAAAGCGAAGTCAAAAAGCCAATGTGGGAAGTTTGAGagagaaaatttgaaaaatggaGCAAATGAAGCTCCTCTTCCCATATCTGTCTTCCTTGTTGCCAGTGTGTTGAAAGATAAGAGCGCAAAACTACTGACAGAAGCTCGGGGCCTCGATGACGTTGTCAAGatACTGAATGATATGACTGGCAACCTAGATGCCAAAAAGGCTTGCACTGGAGCAATGAAGCTGcacaaaaaatatttgaaaaaggaagaaggagaaggtgaGAAACGCAAGCAAGAGAATGGAGGAAGGTTGGCGATGATGAGCAAAGCTCTGTTGAATTGGAACATAAGGAGGAAGTTCGCACTCCTCCCCATTGAAGTAGACCTTGGTGGGGAATCCGTCTTTCCGGATGTCAAAAtccttaatattctttttattgaAAGTCATCATGGATTGCTGCTTTCCGGGCACCCTTGGGTCATAGGGCTTGCTCCCATTCTGCTCCCCGACCAAGTAGTTCATGTCCTTCAACCCATTGAAGAATATAGTATTCAAGCTCTCAATTCTAGTGCCATTGAAGGAGAACACCTTCTCGAAATTGGGCTTCCTGGGTACTGGAAGGTGCTTGATTCCCGCCCACGCCTTCGCCTTCGCGGTTCTGTTGTCGAATGGGACCAGAAGAGCCTCCGAAGGGATTATAGAGTCGTTGTAGTAGGCCGAGAAGGAGACGCAGCAACGGGCCtgcttgggcttgggcttggttATATTGCACACCACCTGCCAGCTGGCAACAGCCAATGTGATTGCCTGAAGCCCACTAGCGTCAGGGAACTCTTGGGGGTCCACACGGATGGGAGGCCCACATTTGTACTGTGGGTTGAGGACGCCGTCGATTTTCCACTTCATGGGAGGGGTGATGGCGGTGCGGAGATTGTTGTCAGGAGGCATCTTCATGACGTTGATCTGGAAGATGGAGTGAGAGCGGGAGGGATCCAAGGTGGCGGGGCACTTATACCCATCGTTCTCCAGCCTAATAGTCTTGGGCATAGGATTGGTTCCTGCTCTCAGCCCAAACTGCGTGCCTTTCATCTGAATCCTAACCGACATTTGGTCAAAATCACCAGCCGTATCAATTGCCGTCTTCAAGTCCGTCATTGGGTTGCCTGCCAGAGTGGTCCCATTCCCCACCGCCGCAGGGAAGTCGCCGGCGTCGATGAGGACGGCGCCATCCGCCGACACCAAAATCTCTCTGTTATGGAACCCAATGAACATATTCCACGCCTTCAGCTCCTCTTCCCCGACGTTGGTCAAGGATGCCTCTGCCTTAAACGCCCATGCCTGATTCGATACGTTCTTCACGTGCGGGAATTCCTTCGTCCGTCCTTGAAACGTGTACGTCAAGAAGATTCCGTTGCACGTGTCCAGCCCTTTTGGTTTAGGCTTTTCGTCTTCGCTGTTGTTGTAGTCGTCTTGTGCTTGTCCGTAACAAGCACCAATGAGAAAAAACAAGAGTAA 2664 0.4553 LFKGSGSGCGQEYRSQQALLWFLLFFLLTTFWCFGMWRDSGAPADSYYEIRPECTDVPKTRFKIKAGKTLSVRKWQAAFTPEGYLDIGKTLSRIQRGGIHPTIRGEVWEFLLGCYDPNSSSEEREQIRQRRRVQYNTWKELCHQLFPLVGSGRFITAPVITEDGQPILDPLVLLETNPEKGAVIPPPDNIGGGVSTDAANNLEKVTDKRIIQWMLTLHQIGLDVLRTDRTLVFYEKQENLSKLWDILAVYAWIDTDVGYCQGMSDLCSPMIILLDDEADAFWCFERLMRRLRGNFRCTDSSVGVEAQLSNLAAITQVIDPKLHQHLEHLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFMMYEDDSDSERSEESKRKAKSKSQCGKFERENLKNGANEAPLPISVFLVASVLKDKSAKLLTEARGLDDVVKILNDMTGNLDAKKACTGAMKLHKKYLKKEEGEGEKRKQENGGRLAMMSKALLNWNIRRKFALLPIEVDLGGESVFPDVKILNILFIESHHGLLLSGHPWVIGLAPILLPDQVVHVLQPIEEYSIQALNSSAIEGEHLLEIGLPGYWKVLDSRPRLRLRGSVVEWDQKSLRRDYRVVVVGREGDAATGLLGLGLGYIAHHLPAGNSQCDCLKPTSVRELLGVHTDGRPTFVLWVEDAVDFPLHGRGDGGAEIVVRRHLHDVDLEDGVRAGGIQGGGALIPIVLQPNSLGHRIGSCSQPKLRAFHLNPNRHLVKITSRINCRLQVRHWVACQSGPIPHRRREVAGVDEDGAIRRHQNLSVMEPNEHIPRLQLLFPDVGQGCLCLKRPCLIRYVLHVREFLRPSLKRVRQEDSVARVQPFWFRLFVFAVVVVVLCLSVTSTNEKKQE 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0008 887 Gene3D - 301 480 - -
Sto4g0008 887 MobiDBLite consensus disorder prediction 382 403 - -
Sto4g0008 887 SMART tbc_4 95 382 IPR000195 -
Sto4g0008 887 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 74 325 IPR035969 -
Sto4g0008 887 ProSiteProfiles TBC/rab GAP domain profile. 98 365 IPR000195 -
Sto4g0008 887 Pfam Rab-GTPase-TBC domain 205 363 IPR000195 -
Sto4g0008 887 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 36 471 - -
Sto4g0008 887 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 303 468 IPR035969 -
Sto4g0008 887 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 198 295 - -
Sto4g0008 887 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 36 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0008 Sto-Chr4 69553 82923 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0008 - - qsu:111989415 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0418 7 3053391 3063121 Sto4g0008 4 69553 82923 CCT