Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0403 ATGAGGAATGATGACCAGAAACCACAGCAAGGAGGTGGTGGGGCACGCACGTGTCGAACCAACGGGTTCTTTCCGAGCTCACTCCGTGCTATCTCCAGCTACTGGAAGGTCGTCTCCTCCGGTGCTTCCAACGTCGCGCGGTCGGCAGCATCTGTTGCGTCGTCGATTGTGGATAGGGATGATGACGCCAGCTCTGATCAGGTTATCTGGTCTGGGTTTGACAAGTTAGAAGGTGAGGGAGATGTCATCCGTCAAGTTCTACTTCTAGGATTTCGTTGTGGCTTCCAGGTTTGGGATGTTGAAGATTTAAAAAATGTACATGACATAGTTTCCAGGCATGATGGTCCTGTTTCTTTTATGCAAATGCTACCAAATCCAATTGCGTCAAAGAGACCAGCAGATAAGTTTGCAGACAGTCGACCTTTATTGGCTATCTGTGCTGATGGTTTTCTTGCTGGAAGAAGTAACATTCAGGATGGGTTGGCTACCCCTCGCAATGAGAGCATGTCAAACTGCCATGAGGAATTGAATGGAAGTTATCTGCCAACTACTGTTCAGTTTTATTCCTTGAGATCTCAATCATATGTTCACGTACTGAGGTTTAGAACAGTTGTTTATTCTGTAAGGTGCAGTTCTCGAGTAGTTGTTGTTTCTCTATCAACGCAGATACAATGTTTTGATGCTGCAACATTAGAAAGGGAGTATACCTTACTAACCAATCCTATAGTTCTAACATGTCCTGGTTCTGGAGGCATAGGCTATGGACCACTTGCGGTGGGTCCAAGATGGGTGGCTTATAGTGGAATCCCAGTTGCAATATCCAATTCTGGAAATGTAAATCCGCAACATTTGACACCTTCTGCAAGCTTTCCTAGTTTTCCTTCAAATGGGAGCTTGGTTGCACACTATGCCAAGGAATCAAGCAAGCAACTTGCTTCTGGGATTGTGTCTCTTGGAGATATGGGGTACAAGAAACTTTCCAGATACTGCTCTGAGCTTCTGTCTGATAGCAATAGTCCTTTGCAATCTGTAAATTCAAGTTGGAGGGGTAATGGAAACACTAGTGGACATTCAGCAGATGAAGACAACATTGGAATGGTGAATACTGTTCTTACTTATTTTGCTTTCCTAGTAATTGGAATTGCATCTTTGTTCATTATTCTCTTTTGGTCTCAAATAGTTATGACAATGTCTTCCCTGTTTTATGTTGTACTTGGCTGTAGCTGGTTTAAGGTTATTGTAAGAGATATTGTCAGTAAAAACATTGTTACACAATTCAGAGCCCACAAAAGTCCTATTTCAGCCTTATGCTTTGATCCCAGTGGCACCATTTTAGTGACTGCTTCAGTTCAGGGGCATAATATAAATGTTTACAAGATAATGCCTGGACTCATCGGGGCATCTGAGGCCGGGCCTTCTAATGTCCATCTCTACACGTTGCAACGTGGCTTTACTAATGCTGTTATACGGGATATTAGTTTCAGTGATGACAGCAATTGGATTATGATTAGTTCCTCAAGAGGCACTAGCCATCTATTTGCTATTAATCCTCAGGGAGGACCTGTGAATATTCAGACCCATGATTCTAGTTTTCCTGCCCAAAATAGTGCATTGGGAGGTGTTACTAATCAACCAATTCTCCATTCTCATAGTTCAGCCTCACAAATACATAAACCGCAGAGCCTGTGTGAAACTGGACCGCCAATCACACTTACTGTTGTGAGCAGAATTAGGAATGGAACTAATGGCTGGAGAGGCACTGTAACTGGGGCAGCTGCAGCTGCAACAGGTAGGATGAGCTCCCTTTCTGGGGCCATTGCTTCATCTTTCTCTTACTGCAAAGGCAGTACCATATATGTTGATGGGAAGTATTCCAAGACAAAGTATCACCTATTGGTTTTCTCGTCCTCTGGTTCTATGATACGATATGCTCTTCGGATCTTAAATGGTCGAGATTCAGCAGTTGTTTCTGAATTAAACCCAGCTTATGAATTAGCTCCACAGGCTGATGCAAGATTAGTAGTGGAAGCTATCCAGAAATGGAATATATGTCAGAGACTTAGTCGACGAGAGCAAGAAGACAACTCTGACATATATGGTGATAATGGGATTTTGGATGGCAATAAAATTCATCCTGAAGAATTGAAACAGGATAATATTACCAGCCCAAAATTCAAGAATGAAGTTGGGAAAGCAAATTCCTCTTCTGAGGAAGAGCGTCATTTTTATATTTCCCAAGCTGAACTGAAGCCTTACCAAAATCTTCAGACTCCACCGTGGTTACTGCCTgagATATGTTTTCATTCAATGGTGAAAGAAGCTGTACTGGATGAAGAACCTGCTACAGGAGATGACATTGAGATTGAAAGGATTCCAACTCGCATGATTCAAGCTAGGTCAAAACACCTGGTTCCTTTTTCTGATTATCATCGGACTCCAAAAGTCCAACAAACAAGGACTTCTGCTCTGGATAGCAAGATAAATGAACATTTGTTGCGTCAGAGTACGGGGATGTCTGAAAATGGCAGGATTTCAGCCAGGAGTATTTTGAATGCACCTGACTGTTTGACCAATTCTGGTGGTGCTGTTGGTGAATTTAACAATGGCATTCAAGGAACTGAATGCAAGGATTATATGCTTCCAGCAAAAACAATGAGctttgtaaataaaaataacaccCCTAAGCCAAGTACTGTGCTTGGGATTGTAAATAATAGAAGAGAGCACTTGAGCATGGATGGTCAATTCAAGTTTGTAAATAGTGACAGGGAGGGCCTGCAAATGGAGAATCACAATCACATTGAAGACAAATAG 2814 0.4211 MRNDDQKPQQGGGGARTCRTNGFFPSSLRAISSYWKVVSSGASNVARSAASVASSIVDRDDDASSDQVIWSGFDKLEGEGDVIRQVLLLGFRCGFQVWDVEDLKNVHDIVSRHDGPVSFMQMLPNPIASKRPADKFADSRPLLAICADGFLAGRSNIQDGLATPRNESMSNCHEELNGSYLPTTVQFYSLRSQSYVHVLRFRTVVYSVRCSSRVVVVSLSTQIQCFDAATLEREYTLLTNPIVLTCPGSGGIGYGPLAVGPRWVAYSGIPVAISNSGNVNPQHLTPSASFPSFPSNGSLVAHYAKESSKQLASGIVSLGDMGYKKLSRYCSELLSDSNSPLQSVNSSWRGNGNTSGHSADEDNIGMVNTVLTYFAFLVIGIASLFIILFWSQIVMTMSSLFYVVLGCSWFKVIVRDIVSKNIVTQFRAHKSPISALCFDPSGTILVTASVQGHNINVYKIMPGLIGASEAGPSNVHLYTLQRGFTNAVIRDISFSDDSNWIMISSSRGTSHLFAINPQGGPVNIQTHDSSFPAQNSALGGVTNQPILHSHSSASQIHKPQSLCETGPPITLTVVSRIRNGTNGWRGTVTGAAAAATGRMSSLSGAIASSFSYCKGSTIYVDGKYSKTKYHLLVFSSSGSMIRYALRILNGRDSAVVSELNPAYELAPQADARLVVEAIQKWNICQRLSRREQEDNSDIYGDNGILDGNKIHPEELKQDNITSPKFKNEVGKANSSSEEERHFYISQAELKPYQNLQTPPWLLPEICFHSMVKEAVLDEEPATGDDIEIERIPTRMIQARSKHLVPFSDYHRTPKVQQTRTSALDSKINEHLLRQSTGMSENGRISARSILNAPDCLTNSGGAVGEFNNGIQGTECKDYMLPAKTMSFVNKNNTPKPSTVLGIVNNRREHLSMDGQFKFVNSDREGLQMENHNHIEDK 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0403 937 SMART WD40_4 419 459 IPR001680 GO:0005515
Sto7g0403 937 SMART WD40_4 473 514 IPR001680 GO:0005515
Sto7g0403 937 SMART WD40_4 192 227 IPR001680 GO:0005515
Sto7g0403 937 SUPERFAMILY WD40 repeat-like 95 520 IPR036322 GO:0005515
Sto7g0403 937 Pfam WD domain, G-beta repeat 423 452 IPR001680 GO:0005515
Sto7g0403 937 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 412 907 IPR045142 GO:0006914
Sto7g0403 937 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 1 367 IPR045142 GO:0006914
Sto7g0403 937 Gene3D - 391 559 IPR015943 GO:0005515
Sto7g0403 937 Pfam Breast carcinoma amplified sequence 3 566 805 IPR022175 -
Sto7g0403 937 PANTHER AUTOPHAGY-RELATED PROTEIN 18F 1 367 - -
Sto7g0403 937 PANTHER AUTOPHAGY-RELATED PROTEIN 18F 412 907 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0403 Sto-Chr7 2940731 2946176 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0403 - - gmx:100784596 1082.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0403 7 2940731 2946176 Sto4g0018 4 220527 225600 CCT
Sto7g0403 7 2940731 2946176 Sto7g0403 7 2940731 2946176 ECH