Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0018 ATGATTGAAAGTGAATTCGAAGAATCGGTGCTCGTTCTGCTCTGGCTAGctgttatttttatttccttgGTTCTGGGAATGAGGAAGGATGACCAGAAACAACATCAGGGAGGAGCTGCGATTCCTCGGTCGGGGCGTACTAATGGATTGATTCCTAGCTCATTCCGTGCTATCTCAAGCTACCTGAGGATCGTTTCCTCTGGTGCTTCTAACGTTGCGCGGTCTGCAGCTTCCGTTGCATCCTCGATTGTGGATAGGGATGGTGACACCGACCACGATCAGGTAATTTGGGCCGGTTTTGATAAGTTAGAGGGGGAGGGAGATGTCATTCGGCAAGTTCTTCTTCTAGGCTATCGGTCTGGTTTCCAGGTTTGGGATGTTGAAGATTCCAAAAATGTGCATGACCTAGTTTCCAGACATGATGGTCCGGTTTCTTTTATGCAAATGCTACCTAAACCAATTGCATCAAAGAGATCAGCAGACAAGTTTGCAGATAGGCGCCCTCTCTTGGTTGTTTGTGCTGACGAAATCTTTGCTGGAGGCAGTAACATTCAGGACGGTTTGGTCACCCCTTGCAATGGGAGCTCTTTAAACTCCCATGATCAAATGAATGGCATTTGTCTTCCAACTACTGTTCAGTTTTATTCTTTGGGATCCCAATCATATGTTCATGTCCTAAAGTTCAGATCAGCTATTTATTCTGTAAGGTGCAGTTCTCGCGTTGTTGCCGTTTCTCAATCCACTCAGATACACTGTTTTGATGCCACTACGTTAGAAAGGGAGTATACTTTACTAACCAATCCTATTGTCATGAGCTGTCCTGCTTCTGGAGGTATAGGCTATGGACCACTTTCAGTGGGTCCAAGATGGCTGGCTTATAGTGGAAGCCCAGTTGCAGTATCTAGTTCTGGGCGTGTCAATCCCCAACATTTGACACCTTCTGCAAGCTTTCCTGGTTTTTCTTCAAATGGGAGCTTGGTTGCACACTATGCCAAAGAGTCCAGCAAGCAGCTTGCTGTGGGAATAGTAACCCTTGGAGATATAGGGTATAAGAAGCTTTCTAGATACTGTTCTGAGCTACGGGCTGATAGCAATGGTTCTTTACAAGCTGCAAACTCTGGTTGGAAGGGAAATGGTATCAATAACGGCTATTCAGGGGATACGGATAATGTTGGAATGGTCATTGTCAGAGATATTGTAAGTAAGAGTGTTGTCAGTCAATTCCGTGCCCACAGAAGTCCTATTTCGGCCTTATGCTTTGATCCCAGTGGCACCATTTTAGTGACTGCTTCAGTTCAGGGGCATAATATGAACGTTTTTAAGATAATGCCTAGACAATCTGACATTTTGTCATCATCTGGTGGTGGTCCTTCATATGTTCATCTTTACAGGCTGCAACGTGGCTTTACAAATGCAGTAATCCAGGATATCAGTTTCAGTAAGGATAGCAGCTGGATTATGATTAGTTCCTCAAGGGGTACTAGCCATCTATTTGCCATAAATCCTCAGGGAGGACCTGTAAATATTCAGTCCTATGATACGAGTTTTAACGAAAAAAATGGTGGATTGGAAGTTAAGACCAATCACGCAGTTCGTTGGCCTGTTTCAAGTTTACAGATGTCTAAACAACAGAGTCTGTGTGTGGCCAGCCCTCCAATCACTCTCTCTGTTGTATGGAGAATTAGAAATGGAAATAATGGCTGGAGAGGCACTGTAAGTGGTGCTGCTGCAGCTGCAACAGGTAGGCTGAGCTTGCATTCTGGGGCTATTGCTTCATCTTTCTTTAACTGCAAAGGTAGCGCCTTGTATGTTGATGGGAACCATTATAAGACAAAATATCACCTGTTGGTTTTTTCACCTACTGGTTCTATGATTCAATATGCTCTCGGGACATCAACTGGCCAAGATTCGATTGTTGTTTCTGGATTAACCCATGCACATGAATCTGCTTTAGAGGTTGATGCAAAAGTAGTTGTTGAGGCTATCCAGAAGTGGAATATATGTCAGAGACACAATAGAAGAGATCGAGAAGAAAATATTGACATCTATGGTGAAAATGGAACTTCAGAAAGCAACAAAATATATCCTGTAGAAGTGAAGGAGGAGAATATCTATAACCCAAAACTCGTGAATGGAATCTTGAAAGTGAATTCTCAACCTGAGGAAGAGCATCATCTATATATTTCAGAAACCGAGCTTCAGACGCACCAAGTTCAGACTCCATTGTGGGCAAAACAGGAGATATATTTCCAGTCAATGGTGAAAGAGGAGAGCATATTGGGTGAAGAAGCTACATCAGGAGGGGAAATTGATATTGGTAATATTCCAACCCGCATGATTGAAGCTAGGTCAAAAGATTTGGTTCCAATTTTTTACTATCTTCAGAATCGAAATTTCCAACAAACAAGGTCTCCTAATCTAGATAGCAAGGTAAATGAACAACAGATGCATCAGAATTCCAGGAACTTTGAAAATGGGCATCTTTCACACACAAGTAACTCAGATGCTATAACTGGGTTTAACAATAGCATCAAAGGAACGGATTGGAACAATCATTTGGTTTCAGCACAATCTAACGGCTTTGTACATAAAAATGACAATGACAGCCTTAAAGCCAATACTCACCATGAGTTTGTAAATACAACAGAGCACTTAAACATGGAGGCTCAACTCATGCTTGTAAATAGTGATAAAGAAGGCATGAAAACGGAGAATCACTTGGAAGAGAATGGCTATGAGTCCGATTAA 2748 0.4221 MIESEFEESVLVLLWLAVIFISLVLGMRKDDQKQHQGGAAIPRSGRTNGLIPSSFRAISSYLRIVSSGASNVARSAASVASSIVDRDGDTDHDQVIWAGFDKLEGEGDVIRQVLLLGYRSGFQVWDVEDSKNVHDLVSRHDGPVSFMQMLPKPIASKRSADKFADRRPLLVVCADEIFAGGSNIQDGLVTPCNGSSLNSHDQMNGICLPTTVQFYSLGSQSYVHVLKFRSAIYSVRCSSRVVAVSQSTQIHCFDATTLEREYTLLTNPIVMSCPASGGIGYGPLSVGPRWLAYSGSPVAVSSSGRVNPQHLTPSASFPGFSSNGSLVAHYAKESSKQLAVGIVTLGDIGYKKLSRYCSELRADSNGSLQAANSGWKGNGINNGYSGDTDNVGMVIVRDIVSKSVVSQFRAHRSPISALCFDPSGTILVTASVQGHNMNVFKIMPRQSDILSSSGGGPSYVHLYRLQRGFTNAVIQDISFSKDSSWIMISSSRGTSHLFAINPQGGPVNIQSYDTSFNEKNGGLEVKTNHAVRWPVSSLQMSKQQSLCVASPPITLSVVWRIRNGNNGWRGTVSGAAAAATGRLSLHSGAIASSFFNCKGSALYVDGNHYKTKYHLLVFSPTGSMIQYALGTSTGQDSIVVSGLTHAHESALEVDAKVVVEAIQKWNICQRHNRRDREENIDIYGENGTSESNKIYPVEVKEENIYNPKLVNGILKVNSQPEEEHHLYISETELQTHQVQTPLWAKQEIYFQSMVKEESILGEEATSGGEIDIGNIPTRMIEARSKDLVPIFYYLQNRNFQQTRSPNLDSKVNEQQMHQNSRNFENGHLSHTSNSDAITGFNNSIKGTDWNNHLVSAQSNGFVHKNDNDSLKANTHHEFVNTTEHLNMEAQLMLVNSDKEGMKTENHLEENGYESD 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0018 915 Gene3D - 111 549 IPR015943 GO:0005515
Sto4g0018 915 Pfam Breast carcinoma amplified sequence 3 551 789 IPR022175 -
Sto4g0018 915 SUPERFAMILY WD40 repeat-like 117 568 IPR036322 GO:0005515
Sto4g0018 915 SMART WD40_4 401 441 IPR001680 GO:0005515
Sto4g0018 915 SMART WD40_4 458 499 IPR001680 GO:0005515
Sto4g0018 915 SMART WD40_4 219 254 IPR001680 GO:0005515
Sto4g0018 915 PANTHER AUTOPHAGY-RELATED PROTEIN 18F 27 880 - -
Sto4g0018 915 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 27 880 IPR045142 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0018 Sto-Chr4 220527 225600 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0018 - - qlo:115955563 1166.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0403 7 2940731 2946176 Sto4g0018 4 220527 225600 CCT