Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0205 ATGAAGAAGCATCTTATATCTGCAATATTAAGGCATATTCAGAGTAATATGGTTGGAAGCCTTCTCACAGAAGATGGAAAACCTGATGAACTTGCTATTAGAAGGCTGTTTGAAAAGATTGATAAGAACAAAGATAACTACATTTCTCAATCTGAGCTAAGAGAAGTACTCATGAATGTCAATTATGTTCAAGCATCAATAAGTGTGGAGGAAGCAGTTAGTAAAGTCATTGAAGAACTTGACCATGACAATGACAGTGTGATTAGTGAGGAGGAATTTGTTACAGGGCTTCAAAAATGGCTTGGCTCATCTTCCTCAAGTCCTAAACTTCTCTCAGATTCTGAGAGTCAAGAAGATATATTCCAAATGTGGGAAGAGGCTGACATGGTGGTGGAAGAAAGGCAAAACAAAGCAGTAGTTGATAAGTCAATATGGGCATGGCTTAAGGCTATAATATATGTGGTGGTAGGAATTGCTATGTTATCTATTCTAGCAGAGCCCCTAATAGAAAGTGTTGGAAAATTCTCAAACAGTGCAGGAGTTAATACATTCTTCATCTCATTCATATTAGTTCCACTGGCTACCAATGCTAAAAAAGCAACTTCTGCAATCAAAGAAGCAAGCCATAAAAAGCGCAGTCATATTCTTATCATTTCTTGA 660 0.3712 MKKHLISAILRHIQSNMVGSLLTEDGKPDELAIRRLFEKIDKNKDNYISQSELREVLMNVNYVQASISVEEAVSKVIEELDHDNDSVISEEEFVTGLQKWLGSSSSSPKLLSDSESQEDIFQMWEEADMVVEERQNKAVVDKSIWAWLKAIIYVVVGIAMLSILAEPLIESVGKFSNSAGVNTFFISFILVPLATNAKKATSAIKEASHKKRSHILIIS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0205 219 SUPERFAMILY EF-hand 30 103 IPR011992 -
Sto7g0205 219 SMART efh_1 32 60 IPR002048 GO:0005509
Sto7g0205 219 SMART efh_1 72 100 IPR002048 GO:0005509
Sto7g0205 219 ProSiteProfiles EF-hand calcium-binding domain profile. 28 63 IPR002048 GO:0005509
Sto7g0205 219 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 141 213 - -
Sto7g0205 219 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 3 110 - -
Sto7g0205 219 Pfam EF-hand domain pair 32 95 IPR002048 GO:0005509
Sto7g0205 219 CDD EFh 33 98 IPR002048 GO:0005509
Sto7g0205 219 ProSitePatterns EF-hand calcium-binding domain. 41 53 IPR018247 -
Sto7g0205 219 ProSiteProfiles EF-hand calcium-binding domain profile. 68 103 IPR002048 GO:0005509
Sto7g0205 219 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 3 110 - -
Sto7g0205 219 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 141 213 - -
Sto7g0205 219 Gene3D - 2 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0205 Sto-Chr7 1492508 1493506 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0205 3 211 EF-hand Containing Proteins AT1G53210 35.000 3.35e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0205 - - aprc:113855499 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0205 7 1492508 1493506 Sto4g2808 4 28925377 28930423 ECH
Sto7g0205 7 1492508 1493506 Sto7g0205 7 1492508 1493506 ECH