Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4308 ATGGACTCCAACAAGAAACTTGCTTTTTCTGAGCCCTTTCTATCTCAGAGAAGGAAGGTCGTTTCTGGGTTTAGTTTAGGGGTTggaatttttcttctcttttttactGTAATATTCCTCAATAGCTCCCTCAAGTCTCCcaaagttcaagtctttcttcAAGGATTTGATAGTGTCGCTGCTAATTCTTCATTTTCCTCTTGGCCCTTTTCCTTTTCAACCAATCATCCTTCTTCCAGTAATGCTTCTGCTACTGCAACTCAAGAATATAAAAACGCAAGCTTGCATTCTGAAGAACAAAGAGTTCAGCAGGAAGAAGAAACCCATGGAACAAATGGTACACTTGTTtctgagaaattaaatttatcGGTTTCAGGAAACACTCGTCCGGAGAATTCTTCCCAGACGGTTAAAGATGTAAACTCGATcggtgaagaaagaagaagcaaTGCAAGTAATAGTGTTTTGGGTGAAGAAGCAAACCAGGAGACACCCAAGAATTCCAGTTCCAGAGCAGAAAAAAAGAGTGTAGGTGATTTTTCAAGCAGTGAAAAGACTTATAATCCTGAAGTAGAGGAAATGAAGATTAATTTCTATGAGAAATGTAACATCTTTGATGGTAAGTGGGTAAGGGATGAATCAAAGCCATACTATCCCTTTGGTTCTTGTCCCCACATCGGTGGGGATTTTAATTGCTACCTCAATGGGAGGCCCGATACCGATTATGTCAAATGGAAATGGCAGCCAAATGGGTGCGACATTCCAAGTTTAAATGCAACTGATTTTCTGGAGAGATTGAGAGGGCAGAAGCTTGTTTTTGTGGGAGATTCATTGAACCGAAACATGTGGGAGTCCTTGGTTTGTATACTCCGACAAAGCGTGGCTGATAAGAAACGTGTTTATGAGATCTCAGGAAGGACAGAGTTTAAAAAGAAAGGGTTTTATGCTTTTAGATTTGAGGATTATAATTGTACAGTGGACTTTGTTAGTTCACCATTCCTGGTTCAAGAATCAACCTTCCAAGGCAAGAATGGTTCATTTGAAACATTAAGACTGGATGTGATGGACCAGACAACTCACATGTACCATGATGCAGATATCATAGTGTTCAATACAGGCCATTGGTGGACTCATGAGAAAACATCCAGAGGAGAAGACTATTATCAAGAAGGGAACTACATACACCCCAGACTCAAGGTTCTGGATGCTTATACAAGAGCTCTCACCACTTGGGCTCGGTGGATTGACAGAAACATCGATAGCAATCGAACTCAAGTCTTCTTCCGAGGATATTCACTCACCCATTTCAAGGGAGGGCAATGGAATTCAGGAGGACAGTGTGACAAAGAGACAGAGCCGATATACAACGAAACGTACCTACAAAAGTATCCGTCGAAAATGCGAGCTCTAGATCATGTCATCCCAAAGATGAAAACCCCAGTGATGTATTTGAACATAAGCAGGCTCACAGATTACAGGAAAGATGGACATCCCTCTATATACAGACTGGATTACAAGACAAACCAACATCAAAACTCTGCAGAGCATTACCAAGATTGCAGCCATTGGTGCTTGCCTGGAGTTCCCGACACTTGGAACCATTTGCTCTATGTTTCTCTCTTGCAACATGGGAAGGCCACATGGAAATACCTCAACTAA 1659 0.3978 MDSNKKLAFSEPFLSQRRKVVSGFSLGVGIFLLFFTVIFLNSSLKSPKVQVFLQGFDSVAANSSFSSWPFSFSTNHPSSSNASATATQEYKNASLHSEEQRVQQEEETHGTNGTLVSEKLNLSVSGNTRPENSSQTVKDVNSIGEERRSNASNSVLGEEANQETPKNSSSRAEKKSVGDFSSSEKTYNPEVEEMKINFYEKCNIFDGKWVRDESKPYYPFGSCPHIGGDFNCYLNGRPDTDYVKWKWQPNGCDIPSLNATDFLERLRGQKLVFVGDSLNRNMWESLVCILRQSVADKKRVYEISGRTEFKKKGFYAFRFEDYNCTVDFVSSPFLVQESTFQGKNGSFETLRLDVMDQTTHMYHDADIIVFNTGHWWTHEKTSRGEDYYQEGNYIHPRLKVLDAYTRALTTWARWIDRNIDSNRTQVFFRGYSLTHFKGGQWNSGGQCDKETEPIYNETYLQKYPSKMRALDHVIPKMKTPVMYLNISRLTDYRKDGHPSIYRLDYKTNQHQNSAEHYQDCSHWCLPGVPDTWNHLLYVSLLQHGKATWKYLN 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4308 552 Pfam PMR5 N terminal Domain 200 253 IPR025846 -
Sto6g4308 552 MobiDBLite consensus disorder prediction 76 93 - -
Sto6g4308 552 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 13 547 IPR029962 GO:0016413
Sto6g4308 552 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 254 537 IPR026057 GO:0016740
Sto6g4308 552 MobiDBLite consensus disorder prediction 107 167 - -
Sto6g4308 552 MobiDBLite consensus disorder prediction 168 186 - -
Sto6g4308 552 MobiDBLite consensus disorder prediction 76 186 - -
Sto6g4308 552 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 2 13 547 IPR029967 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4308 Sto-Chr6 45861863 45864247 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4308 - - gmx:100804622 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4308 6 45861863 45864247 Sto11g1141 11 11392753 11395261 CCT
Sto6g4308 6 45861863 45864247 Sto6g4308 6 45861863 45864247 ECH