Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1141 ATGCCTATGTGTAgttccctctctttctttctctctgaaCAGAAGATTCATCTTCCCAACACTACCACTTcttccttcctctctctctctctacctccaaAACGACACCGCATCACTctgttttccttcttcttcttcttcttctttctcagaGCACATGCTTGCATGCATGTTCTTGTCCTCTCTTCTTCCATGGACTTGAAACGACTTCCATTTCCAGAGCCGTTTCTTACTCCCAGAAGGAAGGTCGTTTCCTTGTGTTTCGTGGTTTCTGCTTATCTTCTAATTTTCACTTTACTCTTACACAACCATTCCGCCCCTGTTTCCAAAATCAACGTTTTACTCAATCCTATTCCTTCTTGTTCGTCTTCTTTCAATAAAACTCCCCAAGCCAATGCGTCTGTACTAAAAGAGACCACCCCTTTAAGGAATTTTACCCACAATGTTAAAACCTCAAGCTTGCATGTTGGAGATGAAAAGCCAAGTCTTTTGGGTTCTATGGAAGCAGAGTCACCTAAGAATTCCAGTTTTAGTACTGTAATCAACAATGTGGCTAATGCTTCGCATGGTGGGAATTCGAATATTGCGAAGAAGATTAGTTTCTACGAAGAGTGTGACATCTTTGAGGGTAAGTGGGTGAGAGATGAGTCATCGAAGCCTTACTATCCCTTGGGTTCTTGTCCCCACATCGATAGGGATTTTAACTGTCATCTCAATGGAAGGCCAGACTCAGAATATGTGAAATGGAAATGGCAGCCCAATGAGTGCGACATTCCAAGGAACATGTGGGAATCCATGGTGTGTATCTTCCGACAAAGCATAAGGGACAAGAAAAGAGTTTATGAGATCTCAGGAAGGACAGAGTTTAAGAAGAAAGGGTTCTATGCTTTTAGATTTGAGGATTATAATTGTTCAGTGGATTTTGTTAGCTCACCATTCTTAGTTCGGGAATCAAGTTTCAAAGGCAAAAATGGAAGCCTTGAGACATTAAGGTTGGACTTGATGGACAGGACAACTACTATGTACCGTGATGCTGATATCATAGTCTTCAACACAGGACATTGGTGGACACATGAGAAAACATCTCGAggAAAAGAGTATTATCAAGAAGGCAAGCATGTTCACCCAAGAATGGAGGTTCTGGATGCATATAGGAGGGCATTGACCACATGGGCTAAGTGGGTTGACCGAAACATCAATGCCAATCGAACTCAGGTTTTCTTCCGAGGATATTCTGTTACACATTTCAGAGGCGGGCAATGGAATTCGGGAGGGCAGTGTCACAAAGAAACCAAGCCAATATTCAATGAAACATACTTGCAAGATTATCCCTCAAAAATGAGAGTGGTGGAGCAAGTAATCCAAAAAATGAGAATCCCAGTGATGTATATGAACATAAGTAGGCTTACAGATTACAGAAAAGATGGGCATCCTTCTATATACAGAATGGAGTATAAATCAGAAACAGAAAGGAACAATGCTGAGAGATTTCAAGATTGTAGCCATTGGTGCTTGCCTGGAGTACCAGATGCTTGGAATGAATTACTCTATGCTTCTCTCTTACAACATGGAAAGGGCACTTGGACAAAACCCTAG 1596 0.3916 MPMCSSLSFFLSEQKIHLPNTTTSSFLSLSLPPKRHRITLFSFFFFFFFLRAHACMHVLVLSSSMDLKRLPFPEPFLTPRRKVVSLCFVVSAYLLIFTLLLHNHSAPVSKINVLLNPIPSCSSSFNKTPQANASVLKETTPLRNFTHNVKTSSLHVGDEKPSLLGSMEAESPKNSSFSTVINNVANASHGGNSNIAKKISFYEECDIFEGKWVRDESSKPYYPLGSCPHIDRDFNCHLNGRPDSEYVKWKWQPNECDIPRNMWESMVCIFRQSIRDKKRVYEISGRTEFKKKGFYAFRFEDYNCSVDFVSSPFLVRESSFKGKNGSLETLRLDLMDRTTTMYRDADIIVFNTGHWWTHEKTSRGKEYYQEGKHVHPRMEVLDAYRRALTTWAKWVDRNINANRTQVFFRGYSVTHFRGGQWNSGGQCHKETKPIFNETYLQDYPSKMRVVEQVIQKMRIPVMYMNISRLTDYRKDGHPSIYRMEYKSETERNNAERFQDCSHWCLPGVPDAWNELLYASLLQHGKGTWTKP 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1141 531 Pfam PMR5 N terminal Domain 203 257 IPR025846 -
Sto11g1141 531 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 179 528 IPR029962 GO:0016413
Sto11g1141 531 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 258 518 IPR026057 GO:0016740
Sto11g1141 531 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 2 179 528 IPR029967 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1141 Sto-Chr11 11392753 11395261 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1141 - - gmx:100801114 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4308 6 45861863 45864247 Sto11g1141 11 11392753 11395261 CCT
Sto11g1141 11 11392753 11395261 Sto11g1141 11 11392753 11395261 ECH