Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4015 atggatCAGGAGGATTCTAAGCAGAAGCTGTACACACGAATGCGCCTTTGGGAATTTCCGGATCAGTATGTCATTCAGCCCTCGGATGGCTCCTCTGGTTCTTCTTTGTCAATTAATCGAAAGGATGGCTCGATGAAGCTTATTGATGAGATTCCACAATACAACTCCCTTCGAGTTCCTAAGACTTGGAAGATTTTCGGTGTGGTTGGAACGTTGAAACTTTTGGCTGGATCATATTTGCTGGTTATAACTAAGTGTGAAAACTATGGGTCTTATAATGGGCatccaattttcaaaatttcatcCATGAAGACCTTTCCTTGTAATAGTTCTCTTGAGCATGCCCCTGCTGAGCAGAAGAAGGCAGAGACTGAGTTTTCTGGGCTGCTAAATATTGTAGAGAGGAGTTCTGGTCTTTTCTTCTCATATACTGCCAATTTAACCCTGAGTGCCCAGCGATTGCATGATCTGGGTGTTGAATCTAGATCAGTTCCTCTTTGGAGACAGGCAGAGCCTCGGTTTCTGTGGAACAATTATATGTTGGAAGTGCTCATAGATAACAAGCTTGACCCATTCATACTTCCTATAGTCCAAGGCAGTTTTCATAACTTTCAAGCGGCAATTGGGAAGGATATAATTGATGTCACTGTAATTGCTAGGAGATGCACGAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGACAATGATGGTTATGTTGCTAATTTTGTGGAAACTGAGCAAATTATGCAGATCAATGGGTATACAGCTTCTTTTGTTCAGATTCGTGGTTCAATCCCATTGCTCTGGGAGCAAATTGTAGACTTGACATATAAACCTAAGTATGAGTTAGTGAAAGCTGAAGAATCTCCTCGAGTCATGGAGCGTCATCTCCtagatttgagaaaaaaatatgggGCTGTGTTAGCTGTTGATCTTATCAATAAGCATGGAGGAGAGGGGCGGCTGaatgaaaaattttcaaatacaaTACTGCCCATGCTTAGTGATGATGTAAGATACCTGCACTTTGATTTCCATCATGTCTGTGGGCACATTCATTTTGATCGCCTCTCTATCCTTTATGAACAAATTTCAGAATTTCTTGAGAAAAATGGatATCTTCTGTTAAATGAAAAGGGTGAGAAAAGTAAGGAGCAACTTGGAATTGTCAGGACCAATTGTATTGATTGTCTAGACCGTACAAATGTGACTCAGAGCATGATAGCTCGAAATATGTTAGAAAACCAGCTTAGAAGGCTTGGTGTCTTTGCCGCTGAAGAAACCATTAGTTCACACCCAAATCTAGATGAATGCTTTAAGATTTTGTGGGCTGACCATGGGGATGATATAAGCGTTCAATATTCAGGCACTCCTGCTCTAAAAGGAGACTTTACCAGATTTGGGCACCGCACACTTGAAGGAATAGTAAAAGATGGTTTTAATGCTCTCCAACGCTATTATCTGAATAACTTTTGTGATGGAACAAAGCAGGATGCAATTGATCTCCTGCAAGGACATTACATAGTTTCTGCCAGCCGAGATACGTCTCCCTCTTCTCAGAAAGGAGGCCTTGAAGCTATAGCTGTAAGTACAAGTTAA 1605 0.4006 MDQEDSKQKLYTRMRLWEFPDQYVIQPSDGSSGSSLSINRKDGSMKLIDEIPQYNSLRVPKTWKIFGVVGTLKLLAGSYLLVITKCENYGSYNGHPIFKISSMKTFPCNSSLEHAPAEQKKAETEFSGLLNIVERSSGLFFSYTANLTLSAQRLHDLGVESRSVPLWRQAEPRFLWNNYMLEVLIDNKLDPFILPIVQGSFHNFQAAIGKDIIDVTVIARRCTRRNGTRMWRRGADNDGYVANFVETEQIMQINGYTASFVQIRGSIPLLWEQIVDLTYKPKYELVKAEESPRVMERHLLDLRKKYGAVLAVDLINKHGGEGRLNEKFSNTILPMLSDDVRYLHFDFHHVCGHIHFDRLSILYEQISEFLEKNGYLLLNEKGEKSKEQLGIVRTNCIDCLDRTNVTQSMIARNMLENQLRRLGVFAAEETISSHPNLDECFKILWADHGDDISVQYSGTPALKGDFTRFGHRTLEGIVKDGFNALQRYYLNNFCDGTKQDAIDLLQGHYIVSASRDTSPSSQKGGLEAIAVSTS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4015 534 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC6 6 530 IPR030069 GO:0052866
Sto6g4015 534 MobiDBLite consensus disorder prediction 514 534 - -
Sto6g4015 534 Pfam SacI homology domain 66 351 IPR002013 GO:0016791
Sto6g4015 534 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 6 530 - -
Sto6g4015 534 ProSiteProfiles Sac phosphatase domain profile. 130 458 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4015 Sto-Chr6 43948248 43955161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4015 1 530 Acyl Lipid Metabolism Gene Families AT3G51460 71.887 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4015 K21797 - gmx:100796999 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4015 6 43948248 43955161 Sto11g1414 11 13531672 13540732 CCT
Sto6g4015 6 43948248 43955161 Sto6g4015 6 43948248 43955161 ECH