Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1414 ATGATGGAGAAGGCAGATTCTGGGCAGAAGCTGTACACAAAAATGCGGCTCTGGGAATTTCCGGATCAGTATATAATTGAGCCCACGGATGGCTCTTCTGGCTCCTCTTTGACAGTGAGTCGAGTGGATGGCTCGATGAAGCTCATCGATGGGATTCCAGAATGCAACACCCTTCGAGTTCCTAAGATTTGGACAATTTTTGGTGTGGTTGGGATGTTAAAGCTTTTAGCTGgaTCATATTTACTGGCTATAACTGAGCGTCAATGTGTTGGATCTTACTTGGGGCATCCGATCTACAAAGTTTCATGCTTGAAGGTTTTTCCATGTGATAATTCTCTTAATAATGCCTCTGCTGACCATAAGAAGACAGAGATGGAGTTTTCCAGGCTGCTAAATATTGCAGAGAGGACTCATGGTCTGTTTTTCTCATATGAGACCAATTTAACACTGAGTGCCCAGCGATTGAATGACCTTGGTGATGAATCTAAATTGCTTCCTCTGTGGAGACAGGCTGAGCCACGATTTCTATGGAACAATTATATGTTGGAAGTGCTCATAGATAACATGCTTGACCCATTCTTACTCCCGGTGGTTCAAGGCAGTTTTCATTACTTTCAAGCAGCCATTGGGAAGGATATTATTGATGTCACTTTGATTGCCAGGAGATGCACAAGAAGAAAtgGAACTCGAATGTGGAGAAGAGGAGCTGATCCTGATGGTTATGTAGCTAATTTTGTGGAAACTGAGCAAATTATGCAGTACAATGGGTATACAGCATCATTTGTTCAGGTTCGTGGTTCAATTCCGTTGCTCTGGGATCAAATAGTGGACCTGACATATAAACCTAAGTTTGAGTTGGTGAAACTTGAGGAAGCTCCTCGAGTCATGGAGCGGCACTTCCtagatttaagaaaaaaatatgggGCTGTCTTAGCTGTTGATCTTGTCAACAAGCATGGAGGAGAGGGGCGGCTGTGTGAAAAATTTGGAAGTACAATGCAGCGCGTGGCTAGCGATGATGTAAGATATCTGCACTTTGATTTTCATCATATCTGTGGGCATGTTCATTTTGAGCGCCTCTCTATCCTCTATGACCAAATTGTAGACTTTGTTGAGAGAAATGGATATCTTTTATTGAATGAAAAGAAGGAGAAAATGAAGGAGCAACTCGGAATTGTTAGGACCAACTGTATTGATTGTCTAGACCGTACAAATGTAACTCAGAGCATGATTGGCCGAAATATGTTGGAATTGCAACTTAAAAGGCTCGGCGTATTTGGTGCTGAAGAAACCATTAGTTTACATCCAAATCTAGATGAAAACTTTAAGATCATGTGGGCTAATCATGGGGACGATGTAAGTATCCAATATTCAGGCACACCTGCTCTTAAAGGAGACTTTGTCAGATGTGGGCACCGCACAGTTCAAGGAATATTAAAAGATGGATGGAATGCTCTCCTACGCTATTATTTGAATAACTTTGTTGATGGAACAAAGCAGGATGCAATTGATCTCCTGCAAGGACACTACATTGTTTCTGTCGGCAGAGATATGGCTTCATCTTCAAAGAAAGGAGGACTTGAATCTATAGCTTCCTTCCCTCTGGCTTTCTCTCTGGTTATGACTGGATTCATTTTTGCAACCATGTCATTGAGGCAAGTTCAATACGATATTCGGCACTTGTTCATTTCTCTAATGTGGGCAAGCATTAGTATAGTCATAGCAGCATTTGTGAGAGCCAATGGTCGTGTTTTCTGCAACAGACCTCGCCTACACAAGCCTCGTCGTTAA 1791 0.4171 MMEKADSGQKLYTKMRLWEFPDQYIIEPTDGSSGSSLTVSRVDGSMKLIDGIPECNTLRVPKIWTIFGVVGMLKLLAGSYLLAITERQCVGSYLGHPIYKVSCLKVFPCDNSLNNASADHKKTEMEFSRLLNIAERTHGLFFSYETNLTLSAQRLNDLGDESKLLPLWRQAEPRFLWNNYMLEVLIDNMLDPFLLPVVQGSFHYFQAAIGKDIIDVTLIARRCTRRNGTRMWRRGADPDGYVANFVETEQIMQYNGYTASFVQVRGSIPLLWDQIVDLTYKPKFELVKLEEAPRVMERHFLDLRKKYGAVLAVDLVNKHGGEGRLCEKFGSTMQRVASDDVRYLHFDFHHICGHVHFERLSILYDQIVDFVERNGYLLLNEKKEKMKEQLGIVRTNCIDCLDRTNVTQSMIGRNMLELQLKRLGVFGAEETISLHPNLDENFKIMWANHGDDVSIQYSGTPALKGDFVRCGHRTVQGILKDGWNALLRYYLNNFVDGTKQDAIDLLQGHYIVSVGRDMASSSKKGGLESIASFPLAFSLVMTGFIFATMSLRQVQYDIRHLFISLMWASISIVIAAFVRANGRVFCNRPRLHKPRR 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1414 596 Pfam SacI homology domain 67 352 IPR002013 GO:0016791
Sto11g1414 596 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 10 595 - -
Sto11g1414 596 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC6 10 595 IPR030069 GO:0052866
Sto11g1414 596 ProSiteProfiles Sac phosphatase domain profile. 131 459 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1414 Sto-Chr11 13531672 13540732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1414 10 595 Acyl Lipid Metabolism Gene Families AT5G66020 75.128 0.0 965
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1414 K21797 - gmx:100796999 1075.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4015 6 43948248 43955161 Sto11g1414 11 13531672 13540732 CCT
Sto11g1414 11 13531672 13540732 Sto11g1414 11 13531672 13540732 ECH