Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3967 ATGGGTTGTGCAACCTCGAAGAAGCTAAGCAAAGAAGACGACGTCGTCTCCTTCTGCAGAGAAAGAAAAAGCCTCATCAAATTGGCCCTAGAGCGTAGGTATGCGCTTGCAGAGGCACATTGTAAGTACAATCACTCTCTCTATGCTGTAGCATTGGCCATAAGGTTGTTCGTAGCTAGAcattcctcctcttcttctccgTTTCTCCTCACATTCCCTTCTGCTACTACTGATTCTGAACCCACCCCGTTTCTTCAACACAAGCCCTCGTCTGATTCTGAACCCACCTGTGAAGGAAATCCTGGAGTCAAACAATCTaaagataatgatgatgatgatgatgaactcAGTGACGAAGAGGAACCTTTGTGTGAGCATTTTTATGGTGATGTTGGTGCTCCCTTGTCCTCACCACGGAGAAATTATCAATGGGATTTCTTCAACCTGTTTGATGTGAGCTCACAGGTTGTAAGTGGGTTAACTCAGAACACAAGTGAACAAGGTGAAAGAGTGGAATGTGGAAGTAGATTTGTGGGTGAGAATAAGGCTACTAGAACAAGGGATGAAGATGATACCAAATTGGAACCTTGTGGAAGCAAAAAATTGAGTGATATTAATGGAGGCATAGATGGGAGGGAATTGTTGGAAGCACTGAAGGAAGTTGAGGACCATTTTATTAAAGCTTATGACTCTGGTAAGGTTGTCTCTAGGATGCTAGAGGCTCATAGAATCCCCTTGCATTCTGGCCTTGATGATATCAAAGGTTACAAATATGTTATTTTCGCACTTGGAACAGAGAGCTCGAAGAAACTGATTCGGTCAATTACATGGAACCGATCCAATTCAATGCGTTCTTCCTCTGGTAAAAGTCTTCTGACTTCTAGCTCTCGAAGTTCTTCCACTTGGACAGACCTTAGCATTGATTCTTATGAAGACTGCGGAGGAATGGGATCTGGTAGCCACTCCCTGACAATAGAAAGGTTGTATGCCTGGGAGAAGAAGCTCTATGAGGAGGTCAAGGCTGGGGAGGAAATCCGAAAAGTATTTGAGAGGAAGTGCTCgcgatttaaaaataaaaaggctaTAGAAGATAGCCTCCAACTCAGGGATAAATCTTCTGTTGAAGCAGTAGAGTTATATACCAGGATACTGGTTTCGGTTCGAACTGCTGAATCAATTTCCAAGAGAATCCAAAAACTGAAAGACGAAGAATTGTTGCCACAACTCGTTGAGCTGCTAAATGGCCTCATGAAAAATTGGAAGATGATGCTGGAATCACATGAAACTCAATACCAAATCTTGAATCAAGTGAGATTCTTCAACTGTCCTTCATATGGAAAATTCTGCAACGGCTCGCATCGCCTAGCCACTATTGAGCTGGAGGCAGAACTTCAAAACTGGCGTGCTTGCTTCACTGCCATTGTTTCTGCAGAGAAGGCTTATATTGAAGCTCTTCATGGATGGCTATCTGAGTTCAGAGTCAGTGAAGTTGAAATGTACTCTTGGGGAATGTACTCAACCCTACCATATAAGATCAATAAGCCACCACTACTTGTAATCACTCATGATTGGTTGGCTTGGTTGGAGAAAATGCCTGATAAGAAAGTTAACTTTTCCATAAAAAGCTTTAGCAAAGATATCCAAACTCTCTGGGTTCAACAAGGCAAGGAACTGAGACAGAAGAGGAAGGTTGATGAACTTTCCAAGGAAATTGATAGAAGGAATATTGCTTTTCAGAGGGAAGAAAGCAAAATTCTTGGATCAGAGTGCTCAGAACAGGAGGCTGAGGCAAGTGTGCAAACTCGAATTCAATATTTATCGAAGAAAAAAGATCTTTTGGAGACATATAGGAAGAGATTAGAAGCAGAAAGGGCAAAGCACCAATCTAGTTTGGTGGAGACACAGAATATTACTCTGAATGCATTCGAGAGTGGGTTGTGTTCAGTTTTTCAGGCTTTAGCAGAGTTTTCAAAGGCTTCTATCAAAGTGTATGCAAGCCTTGTGAACTATAGTGAAAATGCAAAGTTGCTATTAGAAGGAAATGGCACCTTAAGTGGGTACTCTGAAAGGAGAAACTATCCATTTCAATATGAAATTTCTGAAACCCAACTCCATCTATGCTCACAAAGCTCTGTGAATGATCATAGTTCTCTATTGATCTCAGAGGTTCTTCACAATATCCCACCAAACCAACAAGATTCCGGTGCTTTACTTTTGAAATTAGCCTTGCTTCTGCTAaggaaaaaacaaacaaacgcAAATAGCTCACCTTTCAAACCCCTTCTCTGCTTTACAAGTGGAATCACCTTTCTCCTCAAGAAACAGTATAGCAATGCAACTACCATTACAGTTAAAATGCCTGCAACAAAACCCACCAACATAGTAACACCTGAATTATTGGAACTTTTGGGTTCTGTTAACCCCGGCGGCTCAGCCGCCGCCAGTCGGCGGTGGTACCGATCAACCATTGCAACTTAA 2478 0.4064 MGCATSKKLSKEDDVVSFCRERKSLIKLALERRYALAEAHCKYNHSLYAVALAIRLFVARHSSSSSPFLLTFPSATTDSEPTPFLQHKPSSDSEPTCEGNPGVKQSKDNDDDDDELSDEEEPLCEHFYGDVGAPLSSPRRNYQWDFFNLFDVSSQVVSGLTQNTSEQGERVECGSRFVGENKATRTRDEDDTKLEPCGSKKLSDINGGIDGRELLEALKEVEDHFIKAYDSGKVVSRMLEAHRIPLHSGLDDIKGYKYVIFALGTESSKKLIRSITWNRSNSMRSSSGKSLLTSSSRSSSTWTDLSIDSYEDCGGMGSGSHSLTIERLYAWEKKLYEEVKAGEEIRKVFERKCSRFKNKKAIEDSLQLRDKSSVEAVELYTRILVSVRTAESISKRIQKLKDEELLPQLVELLNGLMKNWKMMLESHETQYQILNQVRFFNCPSYGKFCNGSHRLATIELEAELQNWRACFTAIVSAEKAYIEALHGWLSEFRVSEVEMYSWGMYSTLPYKINKPPLLVITHDWLAWLEKMPDKKVNFSIKSFSKDIQTLWVQQGKELRQKRKVDELSKEIDRRNIAFQREESKILGSECSEQEAEASVQTRIQYLSKKKDLLETYRKRLEAERAKHQSSLVETQNITLNAFESGLCSVFQALAEFSKASIKVYASLVNYSENAKLLLEGNGTLSGYSERRNYPFQYEISETQLHLCSQSSVNDHSSLLISEVLHNIPPNQQDSGALLLKLALLLLRKKQTNANSSPFKPLLCFTSGITFLLKKQYSNATTITVKMPATKPTNIVTPELLELLGSVNPGGSAAASRRWYRSTIAT 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3967 825 Coils Coil 606 637 - -
Sto6g3967 825 MobiDBLite consensus disorder prediction 77 122 - -
Sto6g3967 825 Pfam Protein of unknown function (DUF632) 214 548 IPR006867 -
Sto6g3967 825 MobiDBLite consensus disorder prediction 281 302 - -
Sto6g3967 825 Pfam Protein of unknown function (DUF630) 1 61 IPR006868 -
Sto6g3967 825 PANTHER OS09G0542500 PROTEIN 1 675 - -
Sto6g3967 825 MobiDBLite consensus disorder prediction 77 103 - -
Sto6g3967 825 PANTHER UNCHARACTERIZED 1 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3967 Sto-Chr6 43669789 43675550 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3967 212 566 Acyl Lipid Metabolism Gene Families AT2G27090 31.250 4.52e-43 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3967 - - ming:122083172 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3967 6 43669789 43675550 Sto6g3967 6 43669789 43675550 ECH
Sto6g3967 6 43669789 43675550 Sto11g1460 11 13867703 13870998 ECH