Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1460 ATGGTGTCGCGTTGTAAAGCCAGAAAGCGATACATGAAACAGTTCGTTGAAGCAAGGCATGCTTTCTCTGCGTCTCATGTTATGTACATACGCTCTCTCCGAAGTACAGGATCTGCTCTGCTTCAGTTCGCCAATGCAGAAACCaccgtccaccaccaccaccaccacctcccGCCGGAGCCCCACCCGATCCGCCCCTCTCCGCCGCCGCGGACACCGTCCCCGATGCCGCCTCCCCTGCCCCCAATGAGCCCCAGCTCCGACACCTGGACTTCCATGACGGCCTCCCCTGCTCTGCCTCCGCCGCCTcctcctccgccgccgccgccggtgTCGTCCTCCGCCTGGGATTTCTGGGACCCGTTCGTGCCGCCGCCTCCGGCTTCCTCAAGGTCCGTTACGGAGGAGGAGTGGGAAATGACGACCACGACAGGGTCCGAGGTTGTCGTGACGGGGGCGGCGAGCATGGCGGCGCCGCCGTCTGTGGTGAGTGGGTTCTCGAAAGAGACCCCAAGTAGCGACCTTGCGATGGTGGTTTCGAGAAACTCGAAAGATCTCGTTGAGGTTATAAAAGAGCTTGACGATTACTTTCTCAAAGCTGCTGAAGCTGGTGATCATGTCTCGTTTCTCTTAGAAGTCCCTCGCTCTGGCTTCTCTAATCAAACTAAAACAAGTAGAGTGTACAACTATGGGTGGAGTAGTTTGAGTCCATCGTTGTGGGCATGGGGTTCGAGTCCTAAATTCAATGGATTTGGGAAGTTTAGTGAGGAAATTTCTGTTAGTAATTTTGGGGGTAAAGCTATTGGTGGCGTAAGTGGTGGGAGTCATTGTTCTACAGTGGAGAGATTATATGCATGGGAGAAGAAATTGTACCAAGAGGTCAAGAATGCTGAGAGCATAAAAATGGAGCATGAGAAGAAGGCGTCGGTGCTGAGGAAGCTGGAGATGAAGAGGGGAGACTATGTGAAGACagagaagacaaagaaagagGTTGAGAAATTGGAGTCACAGATGATGGTTGCTTCTCAGGCCATTGAGAGTACATCAAATGAAATCATTAAGTTAAGGGAGACAGAGCTCTACCCTCAACTCCTTGAGCTTGTCAAAGGATTGATGTGCATGTGGAGAAGCATGTATGAATGCCATCAAGTCCAAAAGCACATAGTTCAGCAGCTGGAATACCTCAATACCATACCTTCAAATAAACCCACTTGTGAAATTCATAGGCAAGCAACTCTTCAGCTTGAGCTTGAAGTTCAACAATGGCACCAATCCTTTTGCAACCTCTTCAGGGCTCACAGGGACTACATCCAATCCCTCACAGGTTGGCTAAGACTCAGCCTTTTCCAGTTCAACCGAAACCCACTGACCCGAACCGCCGAAGACTCCAAGATATACTCCCTCTGCGAAGAATGGCACCTTGCTGTGGATCGCATACCCGATAAGGTCGCTTCTGAAGGGATCAAAAGCTTCCTAACTGTCATTCACGCAATTGTAGTTCAACAAACTGAGGAGCATAAGCAGAAGAAGAAGTCGGATTCTGCATTCAAAGTGCTTGAGAAGAAAGTGGTGCAGCTTCGGTCTCTGGAGTGCAAGTATGGTCCGTATTCCATTCCCGAATCCTCCGAGGGTACAAGGAGCAAGAACCCCGTGATGGAGAAGCGCACAAAGGTTGAAACTTTGAAAGCAAAagcagaggaagagaagaaTAAGCATGAGAAATCGGTGAGTGTGACGAGGGCGATGACTCTGAATAACTTGCAGATGGGGTTTCCTCACGTGTTTCAGGGGATTGTGGGGTTTTCGAGCGTGTGTACGGAGGTTTTCGAATCGGTATACAACAAGGCCAAAATCACTCAACAGGAGCATGATGTGAAGAGAATATTAGCTTAG 1893 0.4749 MVSRCKARKRYMKQFVEARHAFSASHVMYIRSLRSTGSALLQFANAETTVHHHHHHLPPEPHPIRPSPPPRTPSPMPPPLPPMSPSSDTWTSMTASPALPPPPPPPPPPPVSSSAWDFWDPFVPPPPASSRSVTEEEWEMTTTTGSEVVVTGAASMAAPPSVVSGFSKETPSSDLAMVVSRNSKDLVEVIKELDDYFLKAAEAGDHVSFLLEVPRSGFSNQTKTSRVYNYGWSSLSPSLWAWGSSPKFNGFGKFSEEISVSNFGGKAIGGVSGGSHCSTVERLYAWEKKLYQEVKNAESIKMEHEKKASVLRKLEMKRGDYVKTEKTKKEVEKLESQMMVASQAIESTSNEIIKLRETELYPQLLELVKGLMCMWRSMYECHQVQKHIVQQLEYLNTIPSNKPTCEIHRQATLQLELEVQQWHQSFCNLFRAHRDYIQSLTGWLRLSLFQFNRNPLTRTAEDSKIYSLCEEWHLAVDRIPDKVASEGIKSFLTVIHAIVVQQTEEHKQKKKSDSAFKVLEKKVVQLRSLECKYGPYSIPESSEGTRSKNPVMEKRTKVETLKAKAEEEKNKHEKSVSVTRAMTLNNLQMGFPHVFQGIVGFSSVCTEVFESVYNKAKITQQEHDVKRILA 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1460 630 MobiDBLite consensus disorder prediction 96 118 - -
Sto11g1460 630 Coils Coil 324 351 - -
Sto11g1460 630 Coils Coil 287 307 - -
Sto11g1460 630 SUPERFAMILY Formin homology 2 domain (FH2 domain) 100 110 - -
Sto11g1460 630 Coils Coil 551 575 - -
Sto11g1460 630 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 2 615 - -
Sto11g1460 630 MobiDBLite consensus disorder prediction 62 85 - -
Sto11g1460 630 MobiDBLite consensus disorder prediction 50 118 - -
Sto11g1460 630 Pfam Protein of unknown function (DUF630) 2 47 IPR006868 -
Sto11g1460 630 PANTHER UNCHARACTERIZED 2 615 - -
Sto11g1460 630 Pfam Protein of unknown function (DUF632) 186 496 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1460 Sto-Chr11 13867703 13870998 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1460 184 574 Acyl Lipid Metabolism Gene Families AT2G27090 29.630 3.95e-40 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1460 - - aprc:113869576 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1460 11 13867703 13870998 Sto11g1460 11 13867703 13870998 ECH
Sto6g3967 6 43669789 43675550 Sto11g1460 11 13867703 13870998 ECH