Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3940 ATGGTGCTCGAGGCGACAATGATCTGTATTGACAATTCTGAATGGATGCGTAACGGGGATTACTCACCTTCGCGATTTCAAGCTCAAGCAGATGCTGTCAATCTTATTTGCGGTGCTAAAACCCAGTCTAATCCAGAAAATACAGTCGGAGTTCTCACAATGGCAGGGAAGGGGGTTCGTGTTTTGGTGACTCCCACTGGTGATCTCGGCAAGATTTTAGCTTGCATGCAtgGACTAGAAATAGGTGGAGAAATGAACCTAGCTGCTGGCATTCAAGTGGCGCAATTGGCTCTTAAGCACAGGCAAAATAAAAAGCAGCAGCAAAGGATTATCATCTTTGCTGGAAGTCCTATCAAGCATGAGAAGAAAATGCTGGAGGTGATTGGgagaaagttgaaaaaaaatagcGTAGCCCTTGACATTATCAATTttggtgaagaagatgaagggaaGACAGAAAAGCTGGAAGCACTTCTTGCAGCtgttaataataatgataccAGCCACATTGTTCATGTTCCAGCTGGTCCCAGTGCCCTTTCTGATGTACTTATAAGTACTCCTATATTTACTGGGGATGGGGAAGGTGGAAGTGGCTTTGCAGCAGCTGCCGCGGCGGCTGCAGCTGGTGGTGTATCTGGTTTTGAGTTTGGTGTGGATCCAAACTTGGATCCTGAACTAGCTCTTGCTCTAAGAGTTTCAATGGAAGAGGAGAGGGCCAGACAGGAGGCAGCTGCAAAAAAGGCTGCAGAAGATGCGGCCAAACAGGAGAAGGGAGGTGAACCTGAAGCAAGCTCACAAGATGCAACAATGACTGAACGTGCCAGTGCGTCAACTTCTGAAGCTGACAATAAGACAAATGATTTGATGCCCCAGGAGAAGAACGAAGATAAGCCACCAAatgaggaggaaaagaaataa 921 0.4311 MVLEATMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPTGDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQQQRIIIFAGSPIKHEKKMLEVIGRKLKKNSVALDIINFGEEDEGKTEKLEALLAAVNNNDTSHIVHVPAGPSALSDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFEFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEDAAKQEKGGEPEASSQDATMTERASASTSEADNKTNDLMPQEKNEDKPPNEEEKK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3940 306 Pfam von Willebrand factor type A domain 6 115 IPR002035 -
Sto6g3940 306 ProSiteProfiles VWFA domain profile. 5 189 IPR002035 -
Sto6g3940 306 MobiDBLite consensus disorder prediction 287 306 - -
Sto6g3940 306 Gene3D von Willebrand factor, type A domain 3 186 IPR036465 -
Sto6g3940 306 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 1 290 - -
Sto6g3940 306 Coils Coil 232 257 - -
Sto6g3940 306 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 222 241 IPR003903 -
Sto6g3940 306 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 HOMOLOG ISOFORM X1 1 290 - -
Sto6g3940 306 Gene3D - 220 303 - -
Sto6g3940 306 MobiDBLite consensus disorder prediction 242 262 - -
Sto6g3940 306 SUPERFAMILY vWA-like 4 179 IPR036465 -
Sto6g3940 306 SMART VWA_4 2 175 IPR002035 -
Sto6g3940 306 MobiDBLite consensus disorder prediction 242 306 - -
Sto6g3940 306 MobiDBLite consensus disorder prediction 263 286 - -
Sto6g3940 306 CDD VWA_26S_proteasome_subunit 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3940 Sto-Chr6 43511248 43515802 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3940 K03029 - gmx:100814594 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3940 6 43511248 43515802 Sto11g1464 11 13894821 13901381 CCT
Sto6g3940 6 43511248 43515802 Sto6g3940 6 43511248 43515802 ECH