Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1464 ATGATCTGTATTGACAATTCTGAATGGATGCGCAATGGGGACTACGCTCCTTGTCGATTTCAAGCTCAAGCAGACGCTGTCAATCTTATTTGCGGTGCTAAAACTCAGGCTAACCCAGAAAATACAGTGGGAGTTCTGACAATGGCAGGGAAGGGGGTTCGTGTTTTGGTCACCCCTACGGGTGATCTGGGCAAGATATTAGCTTGCATGCATGGACTAGAAATAGGAGGTGAGCTGAATCTAGCTGCGGGCATCCAGGTGGCACAATTGGCTCTTAAGCATCGACAAAATAAGAAGCAGCAGCAAAGGATTATTGTCTTTGCTGGAAGTCCTATCAAGCATGAGAAGAAAATGTTGGAAATGATTGGTAGAAAGTTGAAGAAAAACAGTGTAGCACTTGACATTGTCAATTTTGGTGAAGAAGATGAGGGAAAGACAGAGAAGCTAGAAGCACTCCTTGCAGCTGTTAACAATAACGATAACAGCCACATTGTTACTGTTCCACCGGGTTCAAGTGCTCTTCCTGATGTACTTATTAGTACACCTATATTTACTAGTGATGGGGAAGGTGGAAGTGGTTTTGCAGCAGCTGCTGCAGCAGCTGCAGCTAGTGGTGCATCTGGATTTGAGTTTGGTGTCGATCCCAACTTGGACCCTGAACTGGCTCTTGCTCTGAGAGTTTCAATGGAAGAGGAGAGAGCCAGGCAGGAAGCAGCTGCAAAAAAGGCTGCAGACGAGGCTTCTAAACAAGAGAAAGGAAGTGACCAGCCAGCCAGCTCGCAAGATGCAACAATGACTGAGCATGCAAGTGGAGCAACTTCTGAAGCTGAAAATAAGACGAATGATTTAATGGCATACTTTATTGGAAACATCCTAAGGAAGATATCGGGTCTTGGTTCCTTCTAA 906 0.4536 MICIDNSEWMRNGDYAPCRFQAQADAVNLICGAKTQANPENTVGVLTMAGKGVRVLVTPTGDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPIKHEKKMLEMIGRKLKKNSVALDIVNFGEEDEGKTEKLEALLAAVNNNDNSHIVTVPPGSSALPDVLISTPIFTSDGEGGSGFAAAAAAAAASGASGFEFGVDPNLDPELALALRVSMEEERARQEAAAKKAADEASKQEKGSDQPASSQDATMTEHASGATSEAENKTNDLMAYFIGNILRKISGLGSF 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1464 301 SUPERFAMILY vWA-like 1 173 IPR036465 -
Sto11g1464 301 Coils Coil 226 246 - -
Sto11g1464 301 CDD VWA_26S_proteasome_subunit 1 182 - -
Sto11g1464 301 MobiDBLite consensus disorder prediction 253 276 - -
Sto11g1464 301 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 1 284 - -
Sto11g1464 301 Gene3D - 214 280 - -
Sto11g1464 301 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 HOMOLOG ISOFORM X1 1 284 - -
Sto11g1464 301 Pfam von Willebrand factor type A domain 1 109 IPR002035 -
Sto11g1464 301 SMART VWA_4 1 169 IPR002035 -
Sto11g1464 301 MobiDBLite consensus disorder prediction 234 252 - -
Sto11g1464 301 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 216 235 IPR003903 -
Sto11g1464 301 Gene3D von Willebrand factor, type A domain 1 180 IPR036465 -
Sto11g1464 301 ProSiteProfiles VWFA domain profile. 1 183 IPR002035 -
Sto11g1464 301 MobiDBLite consensus disorder prediction 234 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1464 Sto-Chr11 13894821 13901381 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1464 K03029 - gmx:100814594 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3940 6 43511248 43515802 Sto11g1464 11 13894821 13901381 CCT
Sto11g1464 11 13894821 13901381 Sto11g1464 11 13894821 13901381 ECH