Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3929 ATGCTGCAGGTTCTGTCGGAGGCTATGGATTTGGAGAAGGAAGCTCTGACGAAGGCGTGCGTCGACATGGACCAGAAAGTGGTTATCAATTACTACCCAAAATGCCCTCACCCGGACCTCACTCTCGGACTCAAGCGCCACACCGATCCCGGCACCATCACGCTCCTCCTTCAGGACCAAGTGGGCGGCCTCCAAGCCACCCGGGACAACGGTAACACATGGATCACCGTTCAGCCGGTCCAAGGCGCCTTCGTCGTCAATCTTGGAGACCACTGTCACGTGAGTACTACTTACTaa 297 0.5623 MLQVLSEAMDLEKEALTKACVDMDQKVVINYYPKCPHPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDNGNTWITVQPVQGAFVVNLGDHCHVSTTY 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3929 98 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 20 98 IPR005123 -
Sto6g3929 98 Pfam 2OG-Fe(II) oxygenase superfamily 25 95 IPR044861 -
Sto6g3929 98 Gene3D - 1 97 IPR027443 -
Sto6g3929 98 PANTHER NARINGENIN,2-OXOGLUTARATE 3-DIOXYGENASE 1 93 - -
Sto6g3929 98 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 93 - -
Sto6g3929 98 SUPERFAMILY Clavaminate synthase-like 2 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3929 Sto-Chr6 43428676 43428972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3929 1 96 Glycosyltransferase AT5G59530 41.667 3.48e-22 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3929 K00475 - gmx:100799462 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3929 6 43428676 43428972 Sto6g3929 6 43428676 43428972 ECH
Sto6g3929 6 43428676 43428972 Sto11g1482 11 14075751 14078967 ECH