Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1482 ATGCATGTAGGGAGAGGCGGTGCTAGACTGGAGAGAGATATTCACATACTTCTCATACCCGGAGAAGAGCCGAGACTACTCGCGGTGGCCGGAGAAGCCGGAAGGGTGGAGGAAGAAGCAATGGGGTTAGAGAAAGAGGCAGTGAGGGAAGCATGCATAGAGATGGAGCAGAAGCTAGCCGTCAACTTCTATCCAAAGTGCCCACAGCCAGACCTGACGCTTGGCCTCAAGCGTCACACAGATCCTGGAACCATCACTCTCTTGCTTCAAGATCAAGTGGGTGGCCTTCAAGCTACTAGGGACAATGGCAACACCTGGATCACTGTCAAGCCTATCCAAGGCGCCTTCGTCGTCAACCTCGGCGATCATGGCCACGCCACGCGTTTTGCTGAAGAATACCTGAGCAATGGAAGGTTCAGGAACGCAGATCACCAAGCAGTGGTGAACTCAAACAGTAGCAGATTGTCCATAGCCACATTCCAAAACCCATCACCTGAGGCAATTGTGTATCCTTTGAAGCTCAGAGAGGGAGAGGAGTGTGTGATGAATGAGCCTATCACCTTCTCTGAGATGTACAGAAGGAAGATGGCTAAGGATCTTGAACTTGCTAGGCTCAAGAAGATGGCTAAGGAACAACAACAAGTCGTCTCTGATAAACCCCAAGACAAGCCTAACTTTGAGTCCAAGTCATTGGACCATATTCTTGCTTAA 711 0.5021 MHVGRGGARLERDIHILLIPGEEPRLLAVAGEAGRVEEEAMGLEKEAVREACIEMEQKLAVNFYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDNGNTWITVKPIQGAFVVNLGDHGHATRFAEEYLSNGRFRNADHQAVVNSNSSRLSIATFQNPSPEAIVYPLKLREGEECVMNEPITFSEMYRRKMAKDLELARLKKMAKEQQQVVSDKPQDKPNFESKSLDHILA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1482 236 PANTHER NARINGENIN,2-OXOGLUTARATE 3-DIOXYGENASE 26 215 - -
Sto11g1482 236 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 26 215 - -
Sto11g1482 236 MobiDBLite consensus disorder prediction 212 236 - -
Sto11g1482 236 Pfam 2OG-Fe(II) oxygenase superfamily 57 162 IPR044861 -
Sto11g1482 236 Gene3D - 25 223 IPR027443 -
Sto11g1482 236 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 52 163 IPR005123 -
Sto11g1482 236 SUPERFAMILY Clavaminate synthase-like 35 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1482 Sto-Chr11 14075751 14078967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1482 39 164 Glycosyltransferase AT5G59530 36.508 5.37e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1482 K00475 - ming:122072758 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1482 11 14075751 14078967 Sto11g1482 11 14075751 14078967 ECH
Sto6g3929 6 43428676 43428972 Sto11g1482 11 14075751 14078967 ECH