Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3908 ATGGGTTCTATGGGCGGAGAGGAAGAAGTGGGCGGTGGTGAGGAGAGAATTCTTGTTTCTGTTCGCATTCGACCTCTGAATGATAAGGAACGAGCAAAAAATGATGTGTCGGATTGGGAATGCATCAATGACACTACGGTCATATACAGAAACAAACTTTCAGCTTCCGACAGGTCCTTGTACCCAACGGCGTATACATTCGACAGAGTATTTAGGACCGATTGCTCCACAAGGCAGGTGTACGAAGAAGCAGCTAAGGAAGTTGCACTTTCAGTTGTCAGTGGCATCAACTCAAGCATTTTTGCATATGGACAAACAAGCAGCGGAAAAACATACACCATGAGTGGCATAACTGAGTACACTGTAGCAGACATTTTTAACTACATTGAAAAGCACAAGGAACGAGAATTTGTTTTGAAGTTTTCTGCAATTGAGATTTATAATGAATCTGTGAGGGACCTCCTTAGTTTAGACAGTACTCCACTCAGACTTCTTGATGATCCAGAGAGAGGGACTGTTGTTGAGAGACTCACCGAGGAAACTTTGAGGGACTGGGACCATTTTACAGAACTCATTTCTTTCTGTGAAACTCAAAGGCAGATAGGGGAGACCTCCCTGAATCAAGCAAGCTCCAGATCTCATCAGATTCTCAGACTGACAATTGAAAGTTCTGCACGTGAGTTTCTAGGAAATGACAAGTCAAGCTCTCTTGCGGCTTCAGTGAATTTTGTTGATCTTGCAGGGAGTGAGCGTGCATCCCAGACATTATCAGCTGGTACAAGGTTGAAGGAGGGTTGCCACATAAATCGTAGTTTACTTACTCTAGGAACTGTCATCCGCAAACTCAGCAAGGGAAGAAATGGACATGTTCCTTTCAGAGATTCGAAACTGACCCGCATACTGCAGTCCTCCTTAGGAGGCAATGCTAGAACTGCAATTATCTGCACTATGAGCCCTGCTCGGAGCCACGTTGAACAAACAAGAAACACTCTCTTATTTGCAAGTTGTGCCAAAGAAGTGTCGACTAATGCACAGGTCAATGTGGTGGTGTCTGATAAAGCTTTGGTTAAGCAATTGCAAAAGGAATTGGCTAGACTGGAAAGTGAGTTGAGAAATTCAGGCTCAGGCCGAACATCTGATTCCGATGCATTAATTAGACAAAAAGATCTTCAAATTGAAAAGTTGATGAAAGAGGTAGCAGATTTGACAATGCAACGGGATCTTGCTCAATCTCAGATTAAGGATATGCTTCATGTAGCCAGGGACGATTTATCTTCGTCAGACTTGCTCTTTTTCCAGGAAAGTTTAAATCCTCCATATCCCAAATTACAAGTGCGGGTGTCAAGTTCATGGGACTTTGAAAATCAAATAGTGGAACCAAATTTATCAAGTCATAACTGCACAGAGAGTGTCAGATCGTTTGATGCATCTCAGTATTCAGATGGACACAGTATTAGTTCTGATGACAACTTGTTCCAACTTCCCGACTTTGATAAGAACCTTCCCCGCAGAAATCATTCCCCACGAAGGCCAGTTACAGACTTGGATGCTGTAGACAAGGATGATGAAAACTCAGAGGATCTTTGGAAGGAAGTTAGATGCATTGAGTCAGAAGACGTAATTACTACTACCAAACCTACACACTCCACAGATTTAAGCCCAAATCCTTACTCTCACTCTAATGCATCATCTCCTAGGCCAAATACGGATACCTCAGGACTGACCATAGTTGACAACAGAGAAAATCTGGATTCAGGATCACCAGGGTTAAACTCTCGGGTGAAGACTTCTCCGTGTCTTTCAGAAAGAAATACATCTAGTTTTGTTGTCAGCCCTCTGGGGAAAACTTCTCCGTGTCTGTCAGAAAAAAATACATCTGGTTCTAGAAGTTTGAAGTTGCCTAAAAGTAGAAGTTGTAAAGCTAGCCTCATGATGAATTCAGCTTCATATTGGTTTGACAAGGAAGAAATCATTGAGAGCACGCCTCCTATTGGGTTTGAAAAAGAATTCACAGGAAGACCTGGCAGCTTTCAGGGGAAGGTTTGTACACTCAACTACGATGCCAATGCTGAGAAGCAACCAGAGAATGATTCTGGGAACTCTGAGGGCATTGCTTCTGTTGATGAAGCATGGAATGCCAAAACCTCTACTGAGTTGGAAAGTGATACTATAGATACTATAAGTGCTTCATCTCCTGAGAGAAAGGTGAAGGAAGATCTTGGAAGTGTAAATCAATCAGTCGACCATAAGGTTCCAGATACAGTATCGGAGACTCCCCTATCTGCCAAGAATTTCAAAGATGTTGGGTTGGACCCAATGCAATCTTATGAGGAAGAAAGTCGTTCAAAGTGGCCTTCAGAATTTAAGAGGCTCCAAAGAGAAATCATTGAGCTGTGGGATGCTTGTAATGTTTCATTGGTTCACAGGACTTACTTTTTCCTTCTATTCAAAGGTGATCCATCAGATTCTATCTACATGGAGGTAGAGCTGAGGAGGTTGTCCTACATCAAGCAAACCTTTTCACAAGGTAATCAGACCGTAGAAGATGGACAAGCCCTTACACTTACTACAAGCATGAGATATCTTAGAAGAGAGAGGCAGATGTTGAGCAGGCAAATCCAAAGGCGGCTGTCAAAATCTGATAGAGAGAACCTCTATCTAAAGTGGGGCATCCGTTTGAGTTCAAAAAATAGAGCATTGCAGTTGGCTCATCGCTTGTGGACTGACACACAAGACACGGACCACATAGCAGAAAGTGCTGCGGTTGTTGCAAAGCTGCTTGGTTGTGTAGAGCCAGAACAGGCTTTCAAGGAGATGTTTGGACTCAACTTTGCCCCTCGTCGCCCTAGTAGAAAATCTTTTAGTTGGACTTCCAGTattaagcacattttgtga 2895 0.4276 MGSMGGEEEVGGGEERILVSVRIRPLNDKERAKNDVSDWECINDTTVIYRNKLSASDRSLYPTAYTFDRVFRTDCSTRQVYEEAAKEVALSVVSGINSSIFAYGQTSSGKTYTMSGITEYTVADIFNYIEKHKEREFVLKFSAIEIYNESVRDLLSLDSTPLRLLDDPERGTVVERLTEETLRDWDHFTELISFCETQRQIGETSLNQASSRSHQILRLTIESSAREFLGNDKSSSLAASVNFVDLAGSERASQTLSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTMSPARSHVEQTRNTLLFASCAKEVSTNAQVNVVVSDKALVKQLQKELARLESELRNSGSGRTSDSDALIRQKDLQIEKLMKEVADLTMQRDLAQSQIKDMLHVARDDLSSSDLLFFQESLNPPYPKLQVRVSSSWDFENQIVEPNLSSHNCTESVRSFDASQYSDGHSISSDDNLFQLPDFDKNLPRRNHSPRRPVTDLDAVDKDDENSEDLWKEVRCIESEDVITTTKPTHSTDLSPNPYSHSNASSPRPNTDTSGLTIVDNRENLDSGSPGLNSRVKTSPCLSERNTSSFVVSPLGKTSPCLSEKNTSGSRSLKLPKSRSCKASLMMNSASYWFDKEEIIESTPPIGFEKEFTGRPGSFQGKVCTLNYDANAEKQPENDSGNSEGIASVDEAWNAKTSTELESDTIDTISASSPERKVKEDLGSVNQSVDHKVPDTVSETPLSAKNFKDVGLDPMQSYEEESRSKWPSEFKRLQREIIELWDACNVSLVHRTYFFLLFKGDPSDSIYMEVELRRLSYIKQTFSQGNQTVEDGQALTLTTSMRYLRRERQMLSRQIQRRLSKSDRENLYLKWGIRLSSKNRALQLAHRLWTDTQDTDHIAESAAVVAKLLGCVEPEQAFKEMFGLNFAPRRPSRKSFSWTSSIKHIL 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3908 964 ProSiteProfiles Kinesin motor domain profile. 16 340 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto6g3908 964 MobiDBLite consensus disorder prediction 496 523 - -
Sto6g3908 964 Pfam Kinesin motor domain 22 340 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto6g3908 964 MobiDBLite consensus disorder prediction 499 523 - -
Sto6g3908 964 PRINTS Kinesin heavy chain signature 95 116 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto6g3908 964 PRINTS Kinesin heavy chain signature 204 221 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto6g3908 964 PRINTS Kinesin heavy chain signature 240 258 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto6g3908 964 PRINTS Kinesin heavy chain signature 290 311 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto6g3908 964 Pfam Domain of unknown function (DUF3490) 787 946 IPR021881 -
Sto6g3908 964 Gene3D Kinesin motor domain 11 371 IPR036961 -
Sto6g3908 964 Coils Coil 349 376 - -
Sto6g3908 964 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 8 964 - -
Sto6g3908 964 ProSitePatterns Kinesin motor domain signature. 239 250 IPR019821 GO:0003777|GO:0005524|GO:0007018
Sto6g3908 964 Coils Coil 385 412 - -
Sto6g3908 964 CDD KISc_CENP_E 17 340 - -
Sto6g3908 964 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 372 IPR027417 -
Sto6g3908 964 MobiDBLite consensus disorder prediction 726 745 - -
Sto6g3908 964 MobiDBLite consensus disorder prediction 540 598 - -
Sto6g3908 964 MobiDBLite consensus disorder prediction 611 633 - -
Sto6g3908 964 PANTHER CENTROMERE PROTEIN E 8 964 - -
Sto6g3908 964 SMART kinesin_4 14 348 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3908 Sto-Chr6 43295005 43300360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3908 14 376 Miscellaneous Gene Families AT5G06670 44.474 4.17e-83 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3908 K11498 - gmx:100809766 1268.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3908 6 43295005 43300360 Sto6g3908 6 43295005 43300360 ECH
Sto2g0815 2 7074776 7080606 Sto6g3908 6 43295005 43300360 ECH
Sto10g0122 10 932124 937048 Sto6g3908 6 43295005 43300360 ECH