LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto2g0815	ATGGGGGTTATTGATGGAGAAGACTCAATTAAATGGGAGAAGCAGCAACAAGTTTTGAGTGGTCGAGAAGAGAAAATTCTTGTCCTAGTAAGGTTGAGGCCTTTGAGTGAGAAGGAAATATCTGTGAATGAAGTAGCAGATTGGGAATGCATCAATGATACTACCATATTATACCGGAATACACTTCGGGAGGGTTCCACATTTCCGAGTGCCTACACATTTGACAGAGTGTTTCGGGGTGACTGTTCCACAAAGCAAGTATATGAGGAAGGAGCTAAAGAAATAGCTCTTTCAGCTGTTTGTGGAATTAACTCTAGTATATTTGCATATGGACAAACAAGCAGTGGAAAGACTTACACCATGAATGGAATAACTGAGTATTCTGCAGCAGAGATTTTTGACTATATAAAAAGGCATGAAGAAAGAGCATTTGTGTTGAAGTTCTCAGCAATTGAAATTTACAATGAAGTTATTAGAGACTTGCTTAGTACTGACAACACTCCACTTAGGCTGCGAGATGATCCTGAGAGGGGGACCATTGTAGAGAAACTCACGGAGGAGACTCTGCGAGACTGGGGACATTTGAAAGAGCTCCTATCTTTTTGTGAAGCCCAAAGACAAGTTGGAGAGACGTACCTGAATGATAAGAGTTCTAGATCTCACCAAATTATCAGACTGACTATTGAAAGTTCAGCACGTGAATTCTTGGGAAAAGGCAATTCAGCCACCTTAGCAGCTAGTGTGAATTTTGTTGATTTGGCAGGGAGTGAGCGTGCATCTCAGGCATTATCAGCTGGGGCAAGATTGAAAGAAGGTTGTCATATCAACCGGAGTTTACTTACTCTTGGAACTGTCATTCGAAAGCTTAGTAAGGGTAGACAGGGACACATCAATTACAGAGATTCGAAGTTGACACGCTTACTGCAGCCTTGCTTAGGTGGCAATGCTAGAACAGCCATCATTTGCACTTTGAGTGCTGCTCGAAGCCATGTTGAGCAAACTAGAAATACACTTCTGTTTGCTTGTTGTGCAAAAGAAGTGACCACTAAAGCACAGGTTAATGTAGTGATGTCTGATAAGGCATTGGTTAAGCATTTGCAAAAAGAGGTGGCCAGATTGGAGAGTGAACTGAGAACTCCTGGCCCTGCTACCTCCAATTGTGATTATGCAGCACTGCTGAGAAAGAAAGATCTTCAGATAGAAAAGATGGAAAAGGAGATTAGGGAGCTAACTAAGCAACGGGATCTTGCACAATCTCGTGTTGAGGATTTGTTGCGGATGGTTGGAAATGACCAGAAATCtacaaaaGAAGGGGAGGATATGTGGGAAGATGACTGTTCAGCATCAGAGTCATCAAGCATATATGGTCCTCATCATCCGGATGCACGCTTTAGAGAATTCAACAATCCTCACTTCAATAATGGATACAATGGATTTAATGGTAAAGTGCCCAATCACCACTTAGAGGGGGCAGGAGATTATTCACACTCTGATGATGAGTACTGCAAAGAAGTTCAATGTGTTGAGATGGAGGAGTCTAGTAGAGACAACTCAGAATATCTTGATTTATCCAGAAGTGAGAATGGGAGATTAGCACCACCAATGTCTGGAGAGGTAAATGTAGCAGGTCAGGAAATGTTGGGTCCTGTGAACGAAGACAGGGAAGCTAGCCAAAATGAAGACAATTCAACATATGGTGCACTGGAACAGAGACTTCAAGATGTACAATCAACCACTGATTCTCTTGTTTGTCCTTTCCCAGAAGAAAAGTCTCCACAGGCCATGTCATCAAGTTCTAGGAATTTTAAATTAACAAGGAGCTGGAGTTGTACAGAACATCTCATGACTGGATCTCCTGAGAAGTCAGGAGAAAGAGAGAGCACACCAGCTGATGGGTTTGCAAAAGGCTACCTTGGAAGACCAGAAGGCTTACCAAGAAAGTTTCCTCCATTAAATTATGGTGATGCCACAAGGTTGTCAAGGAATGATTCTCAGTCTTCTattggaacacctagcatgagAACATCTGCTGATGAGGAAATTACCAGCGTCCAAACTTTTGTTGCTGGGATGAAGGAAATGGTCAAACTTGAGTATGGGAAGCAGCTTGTTGATGGTCAgGTTCAGGTGAAGAATGTGAAAGATGCAGGCATAGACCCAATGTTAGAGGCACCCGGAACTCCTCTGGATTGGCCTCTGCAATTCAAGCGGCAGCAAAAGCAGATAGTTGAATTGTGGCAAACTTGCAGTGTATCACTAATCCATAGGACCTACTTCTTTCTTCTGTTCAGGGGTGATCCAACAGACTCCATTTACATTGAAGTGGAGCTTAGAAGACTATCTTTCCTCAAAGAAACATTTTCTCATGAAAATCAATCAGTCAAGAATGGTCAGACAGTTACATTTGCTTCAAGTGTGAAGGCTCTTCGCCGGGAGAGAGAAGTGCTTATCAAGCTTATGCAGAAAAGATTTTCCGAGGAAGAGAGGAAAAGTCTCTTCAAGAAGTGGGGTATTGCATTGGAGTCAAAGCGAAGGAGGATGCAACTAGCGAATCGGTTATGGAGCGACACCAATATGGATCACATCATGGAGAGTGCTTCTGTAATTGCAAACTTGGTGAGATTTTCAGAGCAGGGTAAAGCTTTGAAGGAGATGTTTGGGCTAAGCTTCTTCACACCCCATCAGACAAGGAGAAGATCTTATACTTGGAAAAATAGCAGAGCATCACTTATATAA	2736	0.4211	MGVIDGEDSIKWEKQQQVLSGREEKILVLVRLRPLSEKEISVNEVADWECINDTTILYRNTLREGSTFPSAYTFDRVFRGDCSTKQVYEEGAKEIALSAVCGINSSIFAYGQTSSGKTYTMNGITEYSAAEIFDYIKRHEERAFVLKFSAIEIYNEVIRDLLSTDNTPLRLRDDPERGTIVEKLTEETLRDWGHLKELLSFCEAQRQVGETYLNDKSSRSHQIIRLTIESSAREFLGKGNSATLAASVNFVDLAGSERASQALSAGARLKEGCHINRSLLTLGTVIRKLSKGRQGHINYRDSKLTRLLQPCLGGNARTAIICTLSAARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKHLQKEVARLESELRTPGPATSNCDYAALLRKKDLQIEKMEKEIRELTKQRDLAQSRVEDLLRMVGNDQKSTKEGEDMWEDDCSASESSSIYGPHHPDARFREFNNPHFNNGYNGFNGKVPNHHLEGAGDYSHSDDEYCKEVQCVEMEESSRDNSEYLDLSRSENGRLAPPMSGEVNVAGQEMLGPVNEDREASQNEDNSTYGALEQRLQDVQSTTDSLVCPFPEEKSPQAMSSSSRNFKLTRSWSCTEHLMTGSPEKSGERESTPADGFAKGYLGRPEGLPRKFPPLNYGDATRLSRNDSQSSIGTPSMRTSADEEITSVQTFVAGMKEMVKLEYGKQLVDGQVQVKNVKDAGIDPMLEAPGTPLDWPLQFKRQQKQIVELWQTCSVSLIHRTYFFLLFRGDPTDSIYIEVELRRLSFLKETFSHENQSVKNGQTVTFASSVKALRREREVLIKLMQKRFSEEERKSLFKKWGIALESKRRRMQLANRLWSDTNMDHIMESASVIANLVRFSEQGKALKEMFGLSFFTPHQTRRRSYTWKNSRASLI	911

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto2g0815	911	PRINTS	Kinesin heavy chain signature	102	123	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Sto2g0815	911	PRINTS	Kinesin heavy chain signature	211	228	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Sto2g0815	911	PRINTS	Kinesin heavy chain signature	247	265	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Sto2g0815	911	PRINTS	Kinesin heavy chain signature	297	318	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Sto2g0815	911	CDD	KISc_CENP_E	25	347	-	-
	Sto2g0815	911	Pfam	Kinesin motor domain	31	347	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Sto2g0815	911	Coils	Coil	393	427	-	-
	Sto2g0815	911	MobiDBLite	consensus disorder prediction	433	453	-	-
	Sto2g0815	911	Gene3D	Kinesin motor domain	17	378	IPR036961	-
	Sto2g0815	911	MobiDBLite	consensus disorder prediction	657	676	-	-
	Sto2g0815	911	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	25	379	IPR027417	-
	Sto2g0815	911	SMART	kinesin_4	23	355	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Sto2g0815	911	MobiDBLite	consensus disorder prediction	636	676	-	-
	Sto2g0815	911	ProSitePatterns	Kinesin motor domain signature.	246	257	IPR019821	GO:0003777\|GO:0005524\|GO:0007018
	Sto2g0815	911	PANTHER	KINESIN-LIKE PROTEIN KIN-7F	6	911	-	-
	Sto2g0815	911	Pfam	Domain of unknown function (DUF3490)	734	891	IPR021881	-
	Sto2g0815	911	PANTHER	CENTROMERE PROTEIN E	6	911	-	-
	Sto2g0815	911	ProSiteProfiles	Kinesin motor domain profile.	25	347	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Sto2g0815	911	Coils	Coil	356	376	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto2g0815	Sto-Chr2	7074776	7080606	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto2g0815	23	458	Miscellaneous Gene Families	AT5G06670	37.500	1.28e-79	271

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto2g0815	K11498		-	gmx:100820012	1328.54

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto2g0815	2	7074776	7080606	Sto2g0815	2	7074776	7080606	ECH
	Sto2g0815	2	7074776	7080606	Sto6g3908	6	43295005	43300360	ECH