Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3894 ATGGCATGCAAATCCACCGTTGAATCCTTGTTATTCATCTTCCTCCTATCCCACTCACTTTGTCTTCTTTCTGAGGCATGCCATGCTGTAGACAAGGAAGCATTGCTTGATTTCAAGAGCAACATCATCTCTGACCCTTCCAACCTCCTACTTTCTTGGACATCCTCCTCTGATTGCTGTCATGATTGGGAAGGCATCACGTGTGATTCCACAGGCAGAGTCATCAACCTCACTCGCACTGGCATTATAGAAGAGGATGGCTTCCTCATGGAAACACACTTGTCTGGAGCCTTATCACCTTATCTTGGAAATTTATCTAATCTTCAGGTTCTAGACCTCAGCAATCTCAAGGAATTGAAGGGTCCAATACCATCAGAATTAGGCAAGTTATCTAATCTCACTcgcctttttctttattccaaCATGCTTACAGGTGCTATACCACTAGCTTTCAAAAGTCTTTCCAAGGTAGAGATGTTATACCTTCGCAACAATTACTTATCTGGTAGTGTTCCTTCTTCTGTTTTTAGATCTTTGACTATGCTTTCAGAGTTGGATCTGTCAGCTAACAACTTGTCTGGTAGGATTCCATTTTCAATTGGGAAGCTGTCATTGCTCACTTGGCTTGACTTTCATGATAACAACTTCAAAGGTAAGATTCCAGAATGTATTGGGAATCTCAAGAATCTCAGATATTTGGATTTCTCAGGTAATGAGATAAGTGGAAGACTTCCAAAATCAATAGGCAGTCTTTCCCATTTGGTTTCTTTGTATCTGAATCATAACCAAATTGCTGGAAGCATTCCTTCTTCAGTTGGGAGCCTAAGTTCTCTAATATTCTGCAGCATATCAGAGAACAAGCTCAGAGGCACATTACCTCCATCCATTGGGATGCTCACAAACTTGAAAAGACTAATTCTTGACAACAACCATCTCACTGGGAAACTACCTGCTACCATTGGCCATTTAGCCAATCTAACTGACCTATTTCTCTCAAACAATCATTTCAAAGGAAAAATCCCACCTTCTTTCGGCAACTTGCTCAACCTTCAAACCTTGGATTTGTCAAGAAACCAACTTTCTAGTGAGCTTCCCTCTCAACTCGCTAAACTGCAGAATTTACAGACCTTGGACTTGTCCTTCAATCCTCTAGGACTAGCCACAATACCAAAATGGATTTCAAAATTGAAACTTTTTCGATTACAATTAGCTAACACAGGGATTCAAGGAAAACTTCCCAGCTGGTTAGCTTCATCACCCATAGGATTTCTGGATGTTTCAAGCAACGCATTAACAGGAAAACTACCAAGTTGGATTGGAAACATGACAATGCTTTCTTTTCTGAACATATCAAACAACCAATTCCATTCTTCAATTCCAGATGAGTTCAAGAGCCTTCGGTTTCTGATGGACCTTGATCTCCATTCCAATAAATTCAGCGGTACTCTGAAAGTAATATACGAGAAAGAAGTTGAATTTGCACTTGGGTATTACAACTCCATTGACCTATCTAACAACATGTTCTCTGGTCCCATTGAAGAGGACATTGGGGACAAAGCATCATTGGTTGCCATCAAATCCTTAAATTTATCGCACAACCCATTAGGAGGATGGATACCCAAGTCGATTGGGAAATTGAGAGAACTAGAGATGGTGGAGCTTGAGGGGTGTGAGCTTGAGGGGAAGATTCCAGAAGAACTAGGCAATGCGCAGGAATTGAGCACCATTAAGCTTTCCAAGAACAGGCTAAGTGGGAATATCCCAGAAAAGGTTATAAATTTGATGAAGCTACGAGAGTTTGATGTGTCGAGCAATCAATTAAGCGGGAGGATTCCTGCACATAAAACCATTATCCCAAAATCTGCATTTTTGGGTAATCCTGGATTGTGTGGGCCACCACTTCCTTCTTGTAAACATTCTTAA 1923 0.4051 MACKSTVESLLFIFLLSHSLCLLSEACHAVDKEALLDFKSNIISDPSNLLLSWTSSSDCCHDWEGITCDSTGRVINLTRTGIIEEDGFLMETHLSGALSPYLGNLSNLQVLDLSNLKELKGPIPSELGKLSNLTRLFLYSNMLTGAIPLAFKSLSKVEMLYLRNNYLSGSVPSSVFRSLTMLSELDLSANNLSGRIPFSIGKLSLLTWLDFHDNNFKGKIPECIGNLKNLRYLDFSGNEISGRLPKSIGSLSHLVSLYLNHNQIAGSIPSSVGSLSSLIFCSISENKLRGTLPPSIGMLTNLKRLILDNNHLTGKLPATIGHLANLTDLFLSNNHFKGKIPPSFGNLLNLQTLDLSRNQLSSELPSQLAKLQNLQTLDLSFNPLGLATIPKWISKLKLFRLQLANTGIQGKLPSWLASSPIGFLDVSSNALTGKLPSWIGNMTMLSFLNISNNQFHSSIPDEFKSLRFLMDLDLHSNKFSGTLKVIYEKEVEFALGYYNSIDLSNNMFSGPIEEDIGDKASLVAIKSLNLSHNPLGGWIPKSIGKLRELEMVELEGCELEGKIPEELGNAQELSTIKLSKNRLSGNIPEKVINLMKLREFDVSSNQLSGRIPAHKTIIPKSAFLGNPGLCGPPLPSCKHS 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3894 640 SUPERFAMILY RNI-like 92 510 - -
Sto6g3894 640 Gene3D Ribonuclease Inhibitor 197 285 IPR032675 -
Sto6g3894 640 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 7 640 - -
Sto6g3894 640 ProSiteProfiles Leucine-rich repeat profile. 349 372 IPR001611 GO:0005515
Sto6g3894 640 Gene3D Ribonuclease Inhibitor 389 640 IPR032675 -
Sto6g3894 640 Pfam Leucine Rich Repeat 301 323 IPR001611 GO:0005515
Sto6g3894 640 Pfam Leucine Rich Repeat 526 546 IPR001611 GO:0005515
Sto6g3894 640 SMART LRR_sd22_2 227 253 - -
Sto6g3894 640 SMART LRR_sd22_2 154 187 - -
Sto6g3894 640 SMART LRR_sd22_2 594 622 - -
Sto6g3894 640 SMART LRR_sd22_2 371 388 - -
Sto6g3894 640 SMART LRR_sd22_2 130 151 - -
Sto6g3894 640 SMART LRR_sd22_2 347 366 - -
Sto6g3894 640 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Sto6g3894 640 SUPERFAMILY L domain-like 398 637 - -
Sto6g3894 640 PRINTS Leucine-rich repeat signature 182 195 - -
Sto6g3894 640 PRINTS Leucine-rich repeat signature 347 360 - -
Sto6g3894 640 Gene3D Ribonuclease Inhibitor 286 388 IPR032675 -
Sto6g3894 640 Gene3D Ribonuclease Inhibitor 29 196 IPR032675 -
Sto6g3894 640 SMART LRR_typ_2 154 178 IPR003591 -
Sto6g3894 640 SMART LRR_typ_2 522 546 IPR003591 -
Sto6g3894 640 SMART LRR_typ_2 442 465 IPR003591 -
Sto6g3894 640 SMART LRR_typ_2 130 153 IPR003591 -
Sto6g3894 640 SMART LRR_typ_2 594 625 IPR003591 -
Sto6g3894 640 SMART LRR_typ_2 323 346 IPR003591 -
Sto6g3894 640 SMART LRR_typ_2 251 275 IPR003591 -
Sto6g3894 640 SMART LRR_typ_2 347 370 IPR003591 -
Sto6g3894 640 SMART LRR_typ_2 179 203 IPR003591 -
Sto6g3894 640 SMART LRR_typ_2 299 322 IPR003591 -
Sto6g3894 640 SMART LRR_typ_2 227 250 IPR003591 -
Sto6g3894 640 SMART LRR_typ_2 371 396 IPR003591 -
Sto6g3894 640 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 640 - -
Sto6g3894 640 Pfam Leucine rich repeat 206 264 IPR001611 GO:0005515
Sto6g3894 640 Pfam Leucine rich repeat 131 192 IPR001611 GO:0005515
Sto6g3894 640 Pfam Leucine rich repeat 325 384 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3894 Sto-Chr6 43212977 43214899 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3894 70 637 Receptor kinase-like Gene Family AT5G46330 35.096 2.10e-76 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3894 - - gmx:102664464 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3894 6 43212977 43214899 Sto11g1514 11 14342464 14344021 CCT
Sto6g3894 6 43212977 43214899 Sto6g3894 6 43212977 43214899 ECH